FMO11796.5prime Sequence
566 bp (566 high quality bases) assembled on 2012-05-29
> FMO11796.5prime
CAGTCGACATGTTAAAGTCGCTAGCTCCGATCGAAGGAAACCAACAGCCC
GTGCTGCAGTTGCTCTGGGAGGACAAGGAGGTCAAATTTGATGTGCCTCA
ACTGCACAAGAACCTGCGGAGCGGAGAACGAGTGCTCGACTACATTTACC
ACATCGAAGACAGCAAAGGAAATCCGGGGGACACTGGTCGCCTGATGGTA
ACCAATTTGCGAATTATATGGCACTCGCTGGTCCACAAGAAGTACAATCT
GTCCATTGGCTATGCTCGGATTGGCAACACCAACACTCGGGTAGTTCATA
TGCACTCCAAAGCAAGGATAGCCAGCCAGGCCCTCTACATCCTGGCGGTA
AGCAACGAGACCCGCTTTGAGTTCCTTTTCACCGACGTATCTGGGGAAAC
GTCGCGTCGCGATCAGCCGATCTTCGCCAGCGTGTTCGACGTATATCACC
TTTATCAGCGTACTTATCTCTACCGCGACCTGAAGCTGCGCGGAGCCATC
GTTCAAGCGGGTCAACTGGTTATCCTACCAGATGAGGAGGTCTTTAGCCA
TGTGCAGGGCGTGTGG
FMO11796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1126-RA | 1228 | CG1126-RA | 17..574 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4816696..4816891 | 253..448 | 980 | 100 | Plus |
3R | 32079331 | 3R | 4816487..4816635 | 104..252 | 745 | 100 | Plus |
3R | 32079331 | 3R | 4816952..4817069 | 449..566 | 590 | 100 | Plus |
3R | 32079331 | 3R | 4816334..4816429 | 9..104 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:01:09 has no hits.
FMO11796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:37 Download gff for
FMO11796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1126-RA | 1..558 | 9..566 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:06 Download gff for
FMO11796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1126-RA | 1..559 | 9..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:39 Download gff for
FMO11796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1126-RA | 17..574 | 9..566 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:39 Download gff for
FMO11796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4816334..4816428 | 9..103 | 100 | -> | Plus |
3R | 4816487..4816635 | 104..252 | 100 | -> | Plus |
3R | 4816696..4816891 | 253..448 | 100 | -> | Plus |
3R | 4816952..4817069 | 449..566 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:06 Download gff for
FMO11796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 642056..642150 | 9..103 | 100 | -> | Plus |
arm_3R | 642209..642357 | 104..252 | 100 | -> | Plus |
arm_3R | 642418..642613 | 253..448 | 100 | -> | Plus |
arm_3R | 642674..642791 | 449..566 | 100 | | Plus |