Clone FMO11801 Report

Search the DGRC for FMO11801

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:1
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13445-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11801.5prime Sequence

347 bp (347 high quality bases) assembled on 2012-06-25

> FMO11801.5prime
CAGTCGACATGCAGTCTAACAAGGTTTTCTTCGTGTTCTTTGGTATCATC
GCCATGGTGATCGCCGCCAGTCTCTCCTCGGATGTTGTGGACAAGGGTGA
TGATGTGATCAGCGATCGTCGTTTCCGTTGGGAATTCTCGCAGGACTCGG
ATGAGTCTGCCAACGACTTGCAGGAGGATGATGATGATGATGACGATGCC
GCGGATGATGACAGCGGCAGTGCATCCGAAGAAATTTTGATCATCGAGTA
TCCTGAAGGCTACGAAAGCGGCTCCAATGAAAGCGCCTCCGATGAAAGCG
TCTCCGATGAAAGCGCCTCCAATGAATCTGCAAGCTTTCTAGACCAT

FMO11801.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13445-RA 431 CG13445-RA 14..334 9..329 1605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15809593..15809880 42..329 1440 100 Plus
3L 28110227 3L 15809498..15809533 9..44 180 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:15:46 has no hits.

FMO11801.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:02 Download gff for FMO11801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13445-RA 1..324 9..333 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:14 Download gff for FMO11801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13445-RA 6..342 1..338 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:44 Download gff for FMO11801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13445-RA 6..342 1..338 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:44 Download gff for FMO11801.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15809594..15809888 43..338 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:14 Download gff for FMO11801.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15802694..15802988 43..338 98   Plus