FMO11804.5prime Sequence
937 bp (935 high quality bases) assembled on 2012-06-25
> FMO11804.5prime
CACTCGACATGGGGAATGGCATGAACAAGGTCTTGCCGGGACTTTATGTG
GGCAACTATCGCGACTCCAAGGATCACGCTCAGCTGGAAAGATTCAAGAT
CTCGCACATCATCGCCATACATGACAGTCCGCGGCGTTTGCTGCCGGACA
AGCACTACCTGTGCGTGATGGCCTCGGATACGCCAGACCAGAATCTCTCC
CAATACTTTTCCGTCTGCAACGACTTCATACACGCCGCCCGGCTTCGCGA
AGGCAACGTACTCATCCACTGCCTGGCGGGGATGTCGCGCTCGGTGACCG
TGGCCGTGGCCTATATCATGACGGCCACACACCTGAACTGGAAGGAGGCA
CTTAAGGTGGTTCGAGCTGGTCGCGCTGTAGCCAATCCAAATGCTGGATT
CCAGAGCCAACTGCAGGAGTTTGAGCAGTTTAAGCTGTCCGAGGAACGCC
GCCGCTTGAGGGAACGCTTCCCATCCTCGGCTCTGGAGCAACTGGATCGC
ACTAAGGTGGCCACCGCGCTGGACAACTACCAGGAGTTGCTGCAGAACCG
CGACATCTGCGAGGGTAACTGCTCCCGCGGCGAAAAATGTCCTACAGGCG
TCTGCAACATGGACCCCACAAAAGGGCTTGTTCCGACGTCGTCCCTCCAA
CGCCTCCACTCACTCGCGTCTGCGTGCCCAGTCCTCCAACGCCAACGCCT
CGTCCAGTTCACTTTAGCGTAAGCAGTGCCGCCGCCCAATCCTGCCCCAC
ATCGCCCAAGAACTCACCGCTGCCCATAGTCCGTCGTTCGGTGGGCAATG
AGCGCATACCCGAGGACGAGATCGTCCTGTAACAGCCGCCCACACATCCC
GTTAAGCTGCCGAGTATGCCGCCGCCTTCGAGGATGCTCGCCGTGAGCAG
GAGCAGCGCAACTGCAGCAGCAGCAGCAGCTGTTCAA
FMO11804.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10089-RF | 2289 | CG10089-RF | 555..1481 | 7..933 | 4500 | 99.2 | Plus |
| CG10089-RD | 2045 | CG10089-RD | 311..1237 | 7..933 | 4500 | 99.2 | Plus |
| CG10089-RE | 3283 | CG10089-RE | 652..1558 | 27..933 | 4400 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13468443..13468895 | 598..146 | 2265 | 100 | Minus |
| 3L | 28110227 | 3L | 13467536..13467874 | 933..595 | 1460 | 97.9 | Minus |
| 3L | 28110227 | 3L | 13468952..13469072 | 147..27 | 605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:15:53 has no hits.
FMO11804.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:03 Download gff for
FMO11804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RD | 311..1238 | 7..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:19 Download gff for
FMO11804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RD | 311..1238 | 7..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:47 Download gff for
FMO11804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RD | 311..1238 | 7..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:47 Download gff for
FMO11804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13467534..13467871 | 598..935 | 97 | <- | Minus |
| 3L | 13468444..13468894 | 147..597 | 100 | <- | Minus |
| 3L | 13468953..13469069 | 30..146 | 100 | <- | Minus |
| 3L | 13469777..13469799 | 7..29 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:19 Download gff for
FMO11804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13460634..13460971 | 598..935 | 97 | <- | Minus |
| arm_3L | 13461544..13461994 | 147..597 | 100 | <- | Minus |
| arm_3L | 13462053..13462169 | 30..146 | 100 | <- | Minus |
| arm_3L | 13462877..13462899 | 7..29 | 100 | | Minus |
