FMO11807.5prime Sequence
1039 bp (988 high quality bases) assembled on 2012-06-25
> FMO11807.5prime
CAGTCGACATGACAATATCGGGCGGCAATCAACATAATAACAATGCAAAT
CGCAAATATGAAAAACTCATTAAGCAGCCGCAGATGCAATTTGGTAGCTC
CGTGACCGGCACCCAAACGGATGTGGATTCCTGCCGAGATGCGGACGCGG
ATGCGAATGCTGTCCGCCAGGACTTTAGCAATTTCAATAAGCATTTCGGC
AATGGTCATGCCATCACGGATCGCACAATGCTGCTGCGTTTGGAGGACGA
TGTCACCACCGCCGCCGGCATTGTCACGTACAAGGGTAAATCGAATGGCA
ATGGAAATGGGAATGGGAACGGAAGCATCGGGAGTATCAGTCTGGATTTC
AACGGTAGTCCTACCTCATCAACGTCAATTGGCATCGCCAGCGGTAGCAG
CAGCAACACCCACCTGGCCAGTGGTGGTGGCGTTGGTGGAATCGGTGGCT
CCGAGCCAGCCGGTTGGATGTGCCATTGTTGTAATTTAATTGCACGTCGC
TGCTTTGGCATCAACGTTCGACGATGTGTCCTGGCGCTCCTGGCCATTAC
GATGGTTAGCATTTTCTACTACACGCATTATGTCGATACGGGCGTGTTTA
ATGGACTTATTCAACGCGACACGCATCCCGCACCCATTATCAACTGCCGC
ATGATCAACTCTGGTGGCAAACACATCCGGAATGCCTCCCCAGCGCCCGA
CCATCGTTCCGAGGCTCGATTACGGATCGATCCCAAGGTCCTCGTTTTTG
TGGAGACCACATATTCCGGTCTCGGCAGGGACATTGCCGAGCTGCTCGTC
TACAATCGGATCAAATATAAAATCGAAGTGGCGGGCAAGAGTTTACCAGT
TCTTACCATTCTCGACAAAGTCGTATGGCGTGATTGTGTTTGAGACCTGG
ATAAATACCTCAATATGGACAAATGGAAATAGAGAGCTGTTGGACAATAC
TGCCGGGAGTACTCCGTGGGAATGTGGGTTCGTGAGTCCCAGCGAGAAAC
TCTTGGTGGTGCCCAACTTCCGGGACTTTCCGCTGTTGG
FMO11807.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sfl-RB | 5735 | CG8339-RB | 1274..2307 | 9..1037 | 4910 | 98.8 | Plus |
| sfl-RA | 5772 | CG8339-RA | 1311..2344 | 9..1037 | 4910 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6523501..6524096 | 9..604 | 2980 | 100 | Plus |
| 3L | 28110227 | 3L | 6534492..6534702 | 604..814 | 1055 | 100 | Plus |
| 3L | 28110227 | 3L | 6544468..6544695 | 815..1037 | 655 | 94.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:16:00 has no hits.
FMO11807.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:05 Download gff for
FMO11807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sfl-RB | 1267..2309 | 1..1039 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:25 Download gff for
FMO11807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sfl-RA | 1304..2346 | 1..1039 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:50 Download gff for
FMO11807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sfl-RA | 1304..2346 | 1..1039 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:50 Download gff for
FMO11807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6523494..6524096 | 1..604 | 99 | -> | Plus |
| 3L | 6534493..6534702 | 605..814 | 100 | -> | Plus |
| 3L | 6544468..6544697 | 815..1039 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:25 Download gff for
FMO11807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6516594..6517196 | 1..604 | 99 | -> | Plus |
| arm_3L | 6527593..6527802 | 605..814 | 100 | -> | Plus |
| arm_3L | 6537568..6537797 | 815..1039 | 94 | | Plus |
