Clone FMO11810 Report

Search the DGRC for FMO11810

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:10
Vector:pMK33-CFH-BD
Associated Gene/Transcriptgce-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11810.5prime Sequence

1015 bp (1000 high quality bases) assembled on 2012-06-25

> FMO11810.5prime
CAGTCGACATGGAGGGTGCCAGTCGCAGCAGGAACTCCTCCACGAGCCAC
AGTCAGGGTCGCGGCCAGGACATTGAGGATCTCAAGCAAGACATTCCCTA
CTTTGACGAACCGCCGGCGCTCGATGCCGATCTGCTTGTTCTGGGCAAGA
GCGAATGCCAGCTGGACGAGCTGGCCTGGGATCGTGATGCGGATGGGGAT
GCGGATGCGCCGCTAGAGACGGCACCCGCCGTCGATCTCGAGGAGGATAA
CTATCCGGATGAGAACGAGAGCTCGGTGCTGGGCAGCGACTATGCGCCCA
GTGGGAGTGGGAGTGGTGCGAACAGTTTCTACCAATCGCCGACGCCCTCT
GCCACCGGATCTGGTTGCGATCTGATGCTCCGACCGCCATCGAATTCCAT
GTACCATTTCAATTACCGATCGCCGGGTAGTCCAATGCCTGTGGCTCCAG
GAGTGACCAACTCACGAGGTCTGCATCCGTATGCACATTCCCCGGCGCAT
GGTAATCCGCCTGGTTTCTATCCGAATATGTGGTATCCGAATGCACCATA
CGGATCGGCAGGAGCGGCAGGATCCGCCGGAGGAGCCGTTTCCGGTGGCA
GGTACATGGGCTATGGACCGGGCGGAGTGCCAGGAGGAACCAATTCGGGT
CCGGGTGCGGGTCCTGGAGCAATGCAAGCTGCGTATCCTGGACACTCGGC
TCACATGCATGCGCTGCATCATCAATATCCGCAGCCACATCCGCACGCCC
ACCCACCCGCAGCATCCGCATCATTCACCACATCCGCACCACCCGCATCC
GCACGAGACCATGATGGAGATGTTTCAGCTCTCGAATAGTGGGTCGAGAG
GCGCGAAACCGAGCCGGAAAAGAATCGGCGGGACAAACTGAACCGGATCC
ATCCAGGAACTAATCCACAATGGTGCCCCCACGGTGGCGGAATCGCCACG
TCTAGTGACCAAACACCGTTCTGCGCTTTGCCGCCCATGCATTGCGATTG
AACATGCCTTGGCAA

FMO11810.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
gce-RE 5120 CG42739-RE 930..1935 7..1015 4745 98.6 Plus
gce-RD 5063 CG42739-RD 873..1878 7..1015 4745 98.6 Plus
gce-RC 5524 CG42739-RC 1334..2339 7..1015 4745 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:15:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15310385..15311216 7..839 4115 99.9 Plus
X 23542271 X 15315088..15315245 842..1002 425 92.6 Plus
Blast to na_te.dros performed on 2014-11-28 03:15:39 has no hits.

FMO11810.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:00 Download gff for FMO11810.5prime
Subject Subject Range Query Range Percent Splice Strand
gce-RD 866..1876 1..1013 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:09 Download gff for FMO11810.5prime
Subject Subject Range Query Range Percent Splice Strand
gce-RC 1327..2337 1..1013 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:40 Download gff for FMO11810.5prime
Subject Subject Range Query Range Percent Splice Strand
gce-RC 1327..2337 1..1013 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:40 Download gff for FMO11810.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15310378..15311216 1..839 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:09 Download gff for FMO11810.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15204411..15205249 1..839 99 -> Plus