FMO11818.5prime Sequence
583 bp (581 high quality bases) assembled on 2012-06-25
> FMO11818.5prime
TTTTCGCTCCTCCTGGTCAGCAGCACAATATGCCAGGGCCTGCCAGATTT
GCACAAACAAATGACGCCGGAGCAGCTGCAGTCAGTCTTCCACGTGGACA
CCCACGACGCAGTGCCCCACTATGAGCTCGTGCAGCTCCAGCACCACGAG
AACAACCACAACCGCCGGCGGCGGAGCATCGGCAAGGGACCAAAGGTCAA
CGCCGCCCTGCCGCCCCACCACGTGAAAAAGGATCTCAGCAAGAACGCCT
ACTACAGCGAACTGAAGCACGAGGCTCTCGCCTCGGGCGGCAACCACCTG
TTCGCCCCGGAAGTGAGTGCCATCAAGTCGCACAACGTCTCGTTCATCGC
CTTCGGCCAGCACCTGAACCTCTCCCTCCGCGCCACCCAAGGACTCTTCA
AGGGCGCGCCCCACCAGCTGCGCATGTGGACCGTGGGCAGTGAGCCCAAT
GCCACCCACGGCCTTGACCTCCGGAGATTGTCCACGAGCAGCACACCAGC
AACGATGTGGGCGAAGTTTTCCAGGACGAGAAGAACATGGCCGCGATCTT
GATGCGGCGCCACATGGAAACCCGGCGACCTGA
FMO11818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9850-RF | 3585 | CG9850-RF | 1080..1658 | 5..583 | 2835 | 99.5 | Plus |
| CG9850-RE | 4642 | CG9850-RE | 1080..1658 | 5..583 | 2835 | 99.5 | Plus |
| CG9850-RD | 4388 | CG9850-RD | 1080..1658 | 5..583 | 2835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23785912..23786355 | 491..49 | 2155 | 99.5 | Minus |
| 2R | 25286936 | 2R | 23779021..23779115 | 583..488 | 430 | 99 | Minus |
| 2R | 25286936 | 2R | 23791996..23792039 | 48..5 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:16:29 has no hits.
FMO11818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:09 Download gff for
FMO11818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9850-RC | 398..979 | 1..582 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:38 Download gff for
FMO11818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9850-RD | 1076..1657 | 1..582 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:05 Download gff for
FMO11818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9850-RD | 1076..1657 | 1..582 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:05 Download gff for
FMO11818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23779022..23779111 | 492..582 | 98 | <- | Minus |
| 2R | 23785912..23786355 | 49..491 | 99 | <- | Minus |
| 2R | 23791996..23792039 | 1..48 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:38 Download gff for
FMO11818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19666545..19666634 | 492..582 | 98 | <- | Minus |
| arm_2R | 19673435..19673878 | 49..491 | 99 | <- | Minus |
| arm_2R | 19679519..19679562 | 1..48 | 91 | | Minus |
