Clone FMO11824 Report

Search the DGRC for FMO11824

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:24
Vector:pMK33-CFH-BD
Associated Gene/Transcriptgalectin-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11824.5prime Sequence

1101 bp (936 high quality bases) assembled on 2012-06-25

> FMO11824.5prime
CAGTCGACATGTGTCTTAGGGTTTTGTATGAAAAAATGATGTGCTGTTGT
CCCAAGCTGAAAAAGGGAGGTTTGAATGAGGCCTCATTTTACGAATATGC
AGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAATTGAGCGAAG
GGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTGCGAGAGGTTT
TCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGGCGCTCCACAT
TAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACCAAAGTACAGG
ACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTTTCTACTAAGT
CGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGGCATGCTATAT
GATATCGGTAAACGGACAACACTTTGCAGCGTACACTCATCGAATCCCTT
ATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAGTAACGTGGAA
ATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTACCCCAGTCAGA
GGCTAATAACATTGAGCTTCACATAGATGATGGGATTAATGAAATTGATG
CCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGTGGTGCATTATTAGC
GCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGTAACAATAGTTCGAA
TGATCTTGGCCTTACTTTGCCTTATTATGGAGCATTGCCACCAAATTTCG
TTTGGTCGATGGTCGATGCTTGAAGATTGAAGGGAGAGTGCGATTACTTC
CCCACTTCGTTTTTATATAACCTGCAACAGGGGCAGGACATATGGGCCAC
ATCCAGTAATTGCATTCCACTTAAACCCACGTTTTTCGAAAGCAAGCAGC
GGCGCTATTGGAAAGGCGGTGTGTGTAGGAATGCCTGCTTATTGAACCTT
GGGCACAAGAAGAGCGTTCGGAGTTGACACAAACTTTCGCCCTGTTCGGT
CTTTTTGTTTAAGCCATTGTTTTACCAAAACATCCTTTGAAGTGTATGTT
CAATCGGCCAGTTTATGACTGATTTTAAATAAGGTTACCCCTGGAGGTGT
G

FMO11824.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
galectin-RB 1694 CG11372-RB 373..1461 9..1099 5010 98 Plus
galectin-RF 1536 CG11372-RF 285..1303 79..1099 4660 97.9 Plus
galectin-RD 1430 CG11372-RD 181..1197 81..1099 4650 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 75076..75959 195..1081 3775 97.5 Plus
2L 23513712 2L 74901..75020 79..198 600 100 Plus
2L 23513712 2L 74501..74573 9..81 365 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:16:14 has no hits.

FMO11824.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:07 Download gff for FMO11824.5prime
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 11..1106 1..1101 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:30 Download gff for FMO11824.5prime
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 367..1462 1..1101 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:52:58 Download gff for FMO11824.5prime
Subject Subject Range Query Range Percent Splice Strand
galectin-RB 367..1462 1..1101 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:52:58 Download gff for FMO11824.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 74495..74572 1..80 95 -> Plus
2L 74903..75018 81..196 100 -> Plus
2L 75078..75979 197..1101 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:30 Download gff for FMO11824.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 74495..74572 1..80 95 -> Plus
arm_2L 74903..75018 81..196 100 -> Plus
arm_2L 75078..75979 197..1101 97   Plus