FMO11825.5prime Sequence
1165 bp (1050 high quality bases) assembled on 2012-06-25
> FMO11825.5prime
CAGTCGACATGATTCCATCAGATATGGACCTAATTGAATCAACCGCGGAG
CAGCCGGACAAACTCTACAACATCAACAGAATCCGAGCGTTTAAAGATGT
TCCCTTCCTGATAAGGCGCACGGAGTCCAAGGACACGATCGTGTCATACG
CCGATGCTGCAGATGAGATTCAAGTTTTGATGAATTTTCTGCGAAAGAAC
GGGGTCCCAGATGAGGCAGGAATTGCTCTACGAGTCACGGAGCACACGCC
GGCCTCTTCTCTTATGATTTTGGCGATCCTCAACAACAAGTGCCACTTTT
TTCCCACGGATAAGATGATGCTGTCACAGGATCTATACTCACAGATGAGC
ACGGCCGGAGTGGACTACCTCGTGGCCAACAAACATTTAACCGTTGCACC
CTTGTACTTCACATTTCTGGGGAGCATCTTGGTGTTTAAGGAGGACTGTA
GGCTATACAGGGTAAAGTTGAAATCCGCTGATGAGACTGTACAATCCAAA
AAGCCGTTACCAGCCAATATGTGCTACACAATCTCCACGACGGGCACTAC
GGGTAAGCCAAAGCTCATACATGTGCCCTATGAATGCATAGCGCCCAACA
TAGTGGGGCTCAGCCAAAAGTTAAACGTCTCCATGGCCGACATCATTTAC
CTTGGCACACCAATTACCTTCGATCCCTTCGTGGTGGAGTTCTTCCTAGC
TCTTCAAAATGGTGCTACTTTACTGACCAGTCGTCACTCCATGAGGGACT
CGCCAAGCAAGGTGCTAAGTGCCCTCTTCCCCGACAACCTGTCCACACCG
GGAATCACTGTTCTGCAGATGACTCCTTCGCTGTTTCGGCAATTTGGTGC
ATCTTCCATCAAAGATCGAGTGCTCAGCGGGTCCAGTTCATTGAGAGTAC
TGCTCCTTGGTGGCGAACCATTTCCCAGCATGTCGAGCTTGTTACTTGGA
TGCATCCAAGTGTCCTGATGCAAGAAGCACAAAATGCACATATATGGAAT
CACGGAAAATATCCTGTTGGAGCTACTGCACATCGGTTCAGTCATTACAA
TCTCCTGGTGCCTTGGGCACGCCTATCGAAAAGGACCGGGTCTGGCGGAA
TTGAATTCCGAAGACATTGAAACCCTCAAGACAAGGAGAAGCTGTTTCCG
GTAAGGTTCCAGGCG
FMO11825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
U26-RC | 3353 | CG13401-RC | 153..1287 | 9..1148 | 5230 | 98.1 | Plus |
U26-RA | 3422 | CG13401-RA | 153..1287 | 9..1148 | 5230 | 98.1 | Plus |
U26-RD | 3433 | CG13401-RD | 153..1298 | 9..1148 | 5110 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8448759..8449097 | 613..275 | 1695 | 100 | Minus |
2L | 23513712 | 2L | 8448425..8448708 | 895..612 | 1405 | 99.6 | Minus |
2L | 23513712 | 2L | 8449158..8449424 | 275..9 | 1335 | 100 | Minus |
2L | 23513712 | 2L | 8448164..8448355 | 1086..894 | 575 | 92.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:16:44 has no hits.
FMO11825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:12 Download gff for
FMO11825.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
U26-RA | 142..1285 | 3..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:46 Download gff for
FMO11825.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
U26-RA | 147..1290 | 3..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:11 Download gff for
FMO11825.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
U26-RA | 147..1290 | 3..1151 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:11 Download gff for
FMO11825.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8449159..8449430 | 3..274 | 98 | | Minus |
2L | 8448425..8448706 | 614..895 | 99 | <- | Minus |
2L | 8448759..8449097 | 275..613 | 100 | <- | Minus |
2L | 8448123..8448353 | 896..1132 | 91 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:46 Download gff for
FMO11825.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8448123..8448353 | 896..1132 | 91 | <- | Minus |
arm_2L | 8448425..8448706 | 614..895 | 99 | <- | Minus |
arm_2L | 8448759..8449097 | 275..613 | 100 | <- | Minus |
arm_2L | 8449159..8449430 | 3..274 | 98 | | Minus |