FMO11834.5prime Sequence
1108 bp (924 high quality bases) assembled on 2012-06-25
> FMO11834.5prime
CAGTCGACATGAGTTCGGAATCTGGCCAACACGACGTTGAATCGAAGCCA
AAATCGGCTCGGAGTACCAGTGCTGGTCACGAATACGAGGATGTGCTTCA
GATTATTGGATTCGGGCGAGTGCAATGGATCGTCCTTTTTGCCGCAGGAC
TTCTCCTGATGATGGTCATAAACGAGACCATGGGCATGTCCTATATTACC
ATAGTATCCCAGTGCGATTTTGAGATGAACTCAATGGATAAGGCGGTCAT
GAGTGCTGCCAGTTTTATCGGCATATTCTGTTCATCATACTTTTGGGGCT
ACCTGAGTGACACTATAGGTCGCAGACCAGTGCTAATCTATACGACGATC
GCCGGGAATTTCTTATCCTTATGCTCCACCGTCATTCCGAACTACTGGCT
TTATGTGTTCATTCGTTTCGGTGTTGGATTTTTCATTGCGGGAGCATCAT
CAACAACCTATGCGTATCTTGGGGAATTCTTCACTCCCCGTCATCGACCA
ATCGCCATTAATTACGCCAGTCTCTTCGTGGGTGTGTCCACTGTCTATGT
TCCAGCTACCGCCTGGCTAATACTTTCGATGGACTGGAGTGTCAGTATAA
CCGATGGCTTCTCCTTACGTCCTTGGAGACTGCTGACCATATGCTACTTG
CTGCCTGGTGTCGTGGGCACATTGATGTTGTGGTCGCTTCCCGAGAGTCC
CAAGATCCTAATGTCCTTGCACAAAACTGAAGAGGCTTTTGCGGCAGTCG
ATTGGATTGCAGTGACGAATTCGGGCAACACTTACACCAATTCAGGTGCA
TAACTAAAACGGAAGATAACGCGAATGGGGAAAATATACTGCTCATATCC
AAGTCAGCGTTTACAACAATCAGAAAATGTGAAGAAACTTTGCCCGCTGC
TATGAGACCTCCACTGCTGAACTTCGTCATCAGCTGTACGATTAGGTGGG
TCAATTTTTCAGTTCTTCGGCATGGGGTCTTTGGGATCCAAAAATCCAAT
CCAATGACTTCAATGCCGCGGTCCATTCCATGAACTGTTGCCAGTTATGA
TGCTTCATAGATCCATGCACCTATGCCTTCCATAAACTTGGCGACGACCC
CTTAATAC
FMO11834.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31106-RB | 1676 | CG31106-RB | 69..1176 | 9..1099 | 4565 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25217389..25217699 | 554..860 | 1345 | 97.7 | Plus |
| 3R | 32079331 | 3R | 25216532..25216695 | 108..271 | 820 | 100 | Plus |
| 3R | 32079331 | 3R | 25216781..25216944 | 270..433 | 820 | 100 | Plus |
| 3R | 32079331 | 3R | 25217212..25217333 | 434..555 | 610 | 100 | Plus |
| 3R | 32079331 | 3R | 25216365..25216465 | 9..109 | 490 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:16:37 has no hits.
FMO11834.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:11 Download gff for
FMO11834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31106-RB | 59..1065 | 1..999 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:42 Download gff for
FMO11834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31106-RB | 61..1067 | 1..999 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:07 Download gff for
FMO11834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31106-RB | 61..1067 | 1..999 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:07 Download gff for
FMO11834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25216357..25216464 | 1..108 | 95 | -> | Plus |
| 3R | 25216533..25216694 | 109..270 | 100 | -> | Plus |
| 3R | 25216782..25216944 | 271..433 | 100 | -> | Plus |
| 3R | 25217212..25217333 | 434..555 | 100 | -> | Plus |
| 3R | 25217391..25217697 | 556..858 | 98 | -> | Plus |
| 3R | 25217761..25217849 | 859..944 | 91 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:42 Download gff for
FMO11834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21043483..21043571 | 859..944 | 91 | == | Plus |
| arm_3R | 21042504..21042666 | 271..433 | 100 | -> | Plus |
| arm_3R | 21042934..21043055 | 434..555 | 100 | -> | Plus |
| arm_3R | 21043113..21043419 | 556..858 | 98 | -> | Plus |
| arm_3R | 21042079..21042186 | 1..108 | 95 | -> | Plus |
| arm_3R | 21042255..21042416 | 109..270 | 100 | -> | Plus |
