FMO11837.5prime Sequence
1141 bp (957 high quality bases) assembled on 2012-06-25
> FMO11837.5prime
CAGTCGACATGTCCGGCAATCAACAGCAGCAGCAACAGCAACAGAAGTCA
TTAACTAACAACGCGGCAGCAGCAGCAACAAACGAAGCAACCACTTTGGG
CCATAATTTGATAAAAATAAATAGCGTTGACAAAATAGTAGGCAAAAGTC
AGGCAGCAACGCAGGCAATTAACAAACTACAGCAGCAGCAGCAGCAGCAG
CACCAACAACAACAAATCCACCAGCGTCGCTCATTGCTGCCAGCAACAGG
AGGAGCAACGAATCCCCACCAGCCACACTCATCGCAGCAACAAAGCGGAA
CGCCAACGCCAACAGCTCAGTCGGCAGCCCAAAAACAGCAGCAGCAGCAG
CAACAATCACATCAATTGCAGACGGTGGCCACGATACACCAGCCGCACTC
CACGCAGCAGCAGGCATTGACTTCCCGCCTGCCCATCCAGCAGCAATCGA
CTAAAGAATTGCCCAATCTAGCCGGCCAGCAGCGCCGCAGCTTCCACTAC
CAGTTGCAAAATCAGCAGCAATCTCTGCGCAGCCCGCAGCTGAAGGCACC
GGCACCCGCCCACTCCATCCCGCCGAGATACCAGCCACCGCCGCAGCCGG
CCACCGGGATCCTAAAGCCGCACTTGCCACTCAAGTATCCGCCGGATATC
CCCCAGCTATCTAGCATCTACATTCCCGACTCCATCAAGCAGCAGCAACA
ACAACAACAGCAGCAACAGTCGCGATATCTACCAGCAACCAGCCGGGAGC
GAAGGATATGCTGAAGTTTGTGCGCAAGCCAGACCAGAACACCCATCGCC
CAATGCCTCGGTCACGTCCAGCGGCACGGGAATACCCACGGCCAATGGCG
GAGGTCGCCTGACCGCCGAGCAGAACCGGCAGTTGCAGTCGTTGGTCAAC
GAACTGCGTGCGCTGAAGGAGCAAATCAGCGCCTGCTGGACACAACCAGG
AGTTGCGGGATCTGTGCTGCTTCCTGGACGACGACCGGCAGAAGGGACGC
AAGCTGGCGCGGGGAATGGCAAAGATTGGGGCGATACACGGCAGCGTGGA
TGCGGCAGGAGGTGGTCCGCGTACAAACAAACTACGTCCGCTGGATAGAA
TAGCAGCAGAGAGCCTATCACCGATAATCTAGAGCTTAAGG
FMO11837.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17265-RA | 3261 | CG17265-RA | 831..1965 | 9..1141 | 5295 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3013502..3014561 | 9..1065 | 4950 | 98.9 | Plus |
Blast to na_te.dros performed 2014-11-28 03:17:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2294..2856 | 164..739 | 376 | 58.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..3002 | 21..722 | 353 | 56.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2297..2852 | 133..719 | 309 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2363..2987 | 142..734 | 268 | 57.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2615..2981 | 4..365 | 245 | 58.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2999 | 14..224 | 229 | 62.2 | Plus |
| BS | 5142 | BS BS 5142bp | 2041..2104 | 191..258 | 141 | 72.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3291..3336 | 177..222 | 113 | 71.7 | Plus |
FMO11837.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:18 Download gff for
FMO11837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17265-RA | 2..1136 | 9..1141 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:05 Download gff for
FMO11837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17265-RA | 824..1965 | 1..1141 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:30 Download gff for
FMO11837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17265-RA | 824..1965 | 1..1141 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:30 Download gff for
FMO11837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3013495..3014572 | 1..1075 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:05 Download gff for
FMO11837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3013495..3014572 | 1..1075 | 98 | -> | Plus |
