FMO11838.5prime Sequence
1173 bp (1041 high quality bases) assembled on 2012-06-25
> FMO11838.5prime
CAGTCGACATGGCACGCAAGAGCCACATGTACAACGCAATACCCGCCGGC
TTTGAGTCGGACGAGGAGAACATGGAGAACCTAATGAGCAACCTGAAGAT
CAAGCGCTTGGAGGACATCACGACAGGTGCTGGAATCGACGGCTGTAACT
TTGACGCCACCTTGGACGCAAAGGCGGAGGAGTTTTTTAAGCTGTTCCGC
GAGAAGTGGAACATGTATAGCAAGAAAAAGTCGCCACATCTGCGCCAGGA
ATTTGGAAGGGCTTTAATGGGCCATCAGGATCCTTTGCTCCTGGCCCTGA
AGATCTTCGCCAACTGCCCAGACAGCAGCAACATCAAGACGAAGAGCTTG
TCACATTTTGTGCTGGACACGGTTTGCAAGCTCCACAAGGATTTCCCGCA
TCTTGGCGAGGGCTGTGATCCCAACACCAGCATGATAGCCTTTAACTTTG
TCAAGACCTCCGGCTTGCTGGCCCTCAACAATGCTGTTATCCATGCCTAC
AGTCTACGTCAGATCCGCGACCTACTGCTTCCCAAGTTGCGCGAACTCCT
GGACAACGGGCTTTACAAAGAGGTCACCCAATGGTCCATCAGTCTGCAGT
TGACGCACGAGTTCGACATGCTGGAACTGGCTTTCCCGCTGATTGCAATT
GAGAAACTACCACTGGCCGAGGAATATCTGGACCATGCCACACAGCAGAG
GTTGCCCTTTGTCAAGTTCTTGGATTCGTTGCTGCACAAGGAGAAGTCGG
TTTTAGAGCTCTGCGAGCATCTACTCGATCGGTACAAAAATCTCAAAATT
TCCCATAACGTGCTCAGCTATCGGCCTATGGCCAAGATTGTGGCGCGACT
GGCCAAGAAGTATGGTTTTGACGACGCCGTCACGCCCAACTATAAGTTCA
CGAAGACGTGCAGCTACTTGCATTACCTTTACCGCGAGTTCGAGAGACGC
GCATGACCCTGGCCAGTTTCCGGGAGGTGTGAGCGTCCATGCCTTTAACA
ACGAGCTGCGCACGGACTTCGTAAAGTATTTTGGCCCTCTGCTGGAGCTC
ATTCTGAAGCCATCTACCTGGTTACCGCGGAAGTCAATATTGACCGAAAA
GATTGTCCGGTTGGAAATCGAAAGCCAAGGTATCCGCAAAACGGGGCCTG
AAGGCGCTCTCAGGCTGGAATCC
FMO11838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nbr-RA | 2335 | CG9247-RA | 82..1211 | 9..1144 | 5260 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21162233..21163002 | 778..9 | 3850 | 100 | Minus |
| 2L | 23513712 | 2L | 21161850..21162177 | 1109..779 | 1235 | 94.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:17:25 has no hits.
FMO11838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:19 Download gff for
FMO11838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9247-RA | 77..1194 | 1..1121 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:07 Download gff for
FMO11838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nbr-RA | 73..1190 | 1..1121 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:33 Download gff for
FMO11838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nbr-RA | 73..1190 | 1..1121 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:33 Download gff for
FMO11838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21161839..21162177 | 779..1121 | 95 | <- | Minus |
| 2L | 21162233..21163010 | 1..778 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:07 Download gff for
FMO11838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21161839..21162177 | 779..1121 | 95 | <- | Minus |
| arm_2L | 21162233..21163010 | 1..778 | 99 | | Minus |
