FMO11841.5prime Sequence
959 bp (957 high quality bases) assembled on 2012-06-25
> FMO11841.5prime
CAGTCGACATGGGCTCGTTCGCTATCCCCCACCCCCACTTATGTCGTGTC
GTGTCGTTGTCTCTCTCTCTCTCTCGTACTCGCTCAAAGCCTGTCACCCA
CTTTTCTGCGCCCGCTCGCCGGCTTTGGCGCGGCCTTAAAACCTTCACGA
CGTCTTGCAAACGGTTGAAAATGGAGAAGACTCCCCGGTACACGCAGCGG
GAGCGGAACATGGTGTTGAGCTACGCGGCGCAGTACAAGGATGTGATCGA
GAACAAGCGCACGGACGCGGAGTCCAACCGCAAGAAGGACGAGGTGTGGC
TGCAGATCGCCAAGGAGTTCAACTCGCGGGTCTACCACCAGCGCAGCGCC
AAGCAGCTGCGCCAGCTTTACAAGAACATGAAGCTGCTGCTCAAAAAGGA
CCTATGCGGCGAGGACAAGAGCAACCATTCGTTCATGGACCTGCTCAACA
CGCTGTCGCACCAGGAGTCCGTGGCCCAGTACATTGCCGAGCAGCTGTCG
CCGGAGGGCGCGGGCGGTGGCGGCGGCGGCGGTAAGCAAGGCGGCGCGGG
CAACGGAGGCGGAAACGGACACCAATCGGACGACTACGACGACTCCAAGA
TGCCCCACTACCACGAGGGCATGGACACGGACGTGATCCTTATCAAGTCG
GAGACAATTAGCGACAACGAGCAGACGGACAATGGCATGGACTGCCTGGA
CGAGGACGATGACGACGACTGCTTTGAGCCACAAGGCGCCGGAGGTGTGC
CTCGAGGAGGAGGACGACGTGCTCTTTCCAACGGACGTGCGCCAGCTGCA
GCAGTGGGATCGTCCGGAGCCGCCGGCGGTGGTGTCTCCGGAGGCTCCCT
TCCCGGAAACATGTCTAGCACGGGATACCGAAACCAGTCGCCGCGCCGCA
AGCTCGCCCGTGTGCTCACGAGACCTCGATTATTTCCAGCGGGAGCTACG
CATCAGCGC
FMO11841.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32813-RJ | 3254 | CG32813-RJ | 96..1050 | 9..959 | 4615 | 99.3 | Plus |
CG32813-RB | 3438 | CG32813-RB | 409..1234 | 138..959 | 3955 | 99 | Plus |
CG32813-RK | 4058 | CG32813-RK | 1034..1854 | 143..959 | 3945 | 99.1 | Plus |
CG32813-RB | 3438 | CG32813-RB | 96..229 | 9..142 | 670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1389601..1390057 | 143..599 | 2285 | 100 | Plus |
X | 23542271 | X | 1390274..1390639 | 598..959 | 1520 | 98.1 | Plus |
X | 23542271 | X | 1388663..1388796 | 9..142 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:17:34 has no hits.
FMO11841.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:21 Download gff for
FMO11841.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32813-RC | 94..1048 | 9..959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:14 Download gff for
FMO11841.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32813-RJ | 96..1050 | 9..959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:38 Download gff for
FMO11841.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32813-RJ | 96..1050 | 9..959 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:38 Download gff for
FMO11841.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1388663..1388796 | 9..142 | 100 | -> | Plus |
X | 1389601..1390057 | 143..599 | 100 | -> | Plus |
X | 1390276..1390639 | 600..959 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:14 Download gff for
FMO11841.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1282696..1282829 | 9..142 | 100 | -> | Plus |
arm_X | 1283634..1284090 | 143..599 | 100 | -> | Plus |
arm_X | 1284309..1284672 | 600..959 | 98 | | Plus |