FMO11842.5prime Sequence
1079 bp (979 high quality bases) assembled on 2012-06-25
> FMO11842.5prime
TGGCCGGCCGATCTCCTCGAAAAGTGCGCCCAAGGACGTGCCGCCTGGTT
GGAGCGGGGTCGACGCTGCAGCGTCCAGGATCAGCAACAGCAGCAGGCCA
CCTGCCACCGACGCTGGGTGAAGCGCAACCGAATCCAAGACGCCTCTTTG
GGCGGCTCATCGGACGATGAGGATTTCCTGGGCGTTCTGCGGGGTCCTAG
CACCTTTGCGAATGCCTTTCTCTACGTGGGCCTGGGCACGGTGGCACTGG
GACTCGTCATCGCGTTCGTTGGCACCGGCGAGAAGGGCTTCAAAACCACG
GAACTAAGACTTATAGGCCCCTCTCTCATAGGATTGGGCCTGATCTGTTG
CATTTTACGCATCCTCTTCTGCATCTGTCCATCGCACTGCATTTCATCTA
GCAAAAAGACGCGGAAGAAAAACGGCAACAAGATTGATGCAGATCACACG
ACATCGTTGCTCAGAAACGAGAGCAAAAGAGTATCTATAGCGAGAGGTCC
TAGTTTTCAGCCCAAATATCCCATAGCGCACAAACGCAGCCAGAGCAAAA
TGCTCAACGAGGGAATGGAGGCACTGCGTCAGATAGCCACCACATCCTTG
TTCATGCAGAACGAGCAGAAGACGGCCATCAATCGCGTGGTGCCGATCAT
CAATGAGCCCGGAAAGCGGTGATGCTCCACTGGAGATGAAGAAGCTGCAG
ACGGCTCTGAATGCCTGCGAGATGAGTGACGATGAGCAGGATCAGGACCA
GGATCAGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGATTGCCAACGTAC
ACAGCCACAACTGCCGTTACGAGTAGTACCACCAAAGACCAACATCAACA
GCAGCCACATCGAGGATAACGAGAGCACTACCCTGAGCACGTTTGACGAA
AAGCCGGACAGCAAGCTGGTGCGTCAGCGGGTGGCACTGCACAACAACGC
TAACAGCAACAGCAGCAGCAGCAGCAGATCAGCACATGTTACGAAGTCGC
AGTCATTGTCCTCCTTCTTCCGGTCAGATTCCTTGGAGGTTGTTGAAGGA
GACTTCCCTGAATGATGCAGCAACGAAAC
FMO11842.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42784-RC | 3621 | CG42784-RC | 483..1567 | 1..1076 | 4910 | 97.5 | Plus |
CG42784-RF | 6640 | CG42784-RF | 3524..4586 | 23..1076 | 4800 | 97.5 | Plus |
CG42784-RI | 5345 | CG42784-RI | 2230..3291 | 24..1076 | 4795 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13497958..13498309 | 671..1015 | 1335 | 96.6 | Plus |
2L | 23513712 | 2L | 13497239..13497438 | 133..332 | 1000 | 100 | Plus |
2L | 23513712 | 2L | 13497500..13497680 | 330..510 | 905 | 100 | Plus |
2L | 23513712 | 2L | 13497739..13497900 | 509..671 | 765 | 99.4 | Plus |
2L | 23513712 | 2L | 13496567..13496698 | 1..132 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:17:37 has no hits.
FMO11842.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:22 Download gff for
FMO11842.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42784-RC | 483..1522 | 1..1031 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:16 Download gff for
FMO11842.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42784-RC | 483..1522 | 1..1031 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:40 Download gff for
FMO11842.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42784-RC | 483..1522 | 1..1031 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:40 Download gff for
FMO11842.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13497741..13497900 | 511..671 | 99 | -> | Plus |
2L | 13496567..13496698 | 1..132 | 100 | -> | Plus |
2L | 13497239..13497437 | 133..331 | 100 | -> | Plus |
2L | 13497502..13497680 | 332..510 | 100 | -> | Plus |
2L | 13497959..13498328 | 672..1031 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:16 Download gff for
FMO11842.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13496567..13496698 | 1..132 | 100 | -> | Plus |
arm_2L | 13497239..13497437 | 133..331 | 100 | -> | Plus |
arm_2L | 13497502..13497680 | 332..510 | 100 | -> | Plus |
arm_2L | 13497741..13497900 | 511..671 | 99 | -> | Plus |
arm_2L | 13497959..13498328 | 672..1031 | 95 | | Plus |