FMO11847.5prime Sequence
1155 bp (997 high quality bases) assembled on 2012-06-25
> FMO11847.5prime
CAGTCGACATGCTGCTACTTCGCCGTTGCCACAAGTTAAAGTTGCGTCCA
TTGGCCCGTCTTTGCTCCGCCGAATTGATACATAAGGATGGCTTCATCGA
GAAGCTGCGCCATAGTTTCGATGAAGAGGAGCGTAGTAATGTGGTGGTGC
CCACGTTCAAAAAGGCTATGCTCTATCCGGATGAGATCGCCGTGAAAGAC
ATCAATGGGGAGTACACTTATTTTCAATTGTATATGGCCGCCAAACGTCT
GGGCATTCAGATCTCAAATATATGTGGCGGCGCCGCGCTTTCGAATGTAA
CATACTTGTGCTCGAACAACGCCCTGTGGATAGCTATACAATGGAGCTGT
TGGATTTCCGGACAAGTGGCAGTTCCACTGGAATCCGGCCAGGCGATAGA
TCAATTGCAACGGCAGGCATCGAACTGCAAGACCAAGCTACTGATAGCCA
CTAAGGAATTTGAGTCACTTGCCCAGGAATTGTCGCAGGGTGTGAAATCA
GCTACCATCATATTGGATCACTCATTTCTCCCGACGGCGGAGAGTGTATC
CTCGACATCGATGTATGCCAAACAGCTGGTGGCGATCCAGGGTGTTATCG
TAACGGAAAAATACGTTTCCAAACGATTTCTATTCCAAGGCACCAGCCAT
GCTGATCTATACGCCCAATGCGGTCAATAGTCCCAAGCCAGTGTTGTTGA
CCCCATCGGAATATCGAAGCTCAGATGCGATGTTTGATCGAGAACTTGGC
ATTTGGGACCTACAGACTGTATGCTGCCAATACTATCCATGAATCGAATG
CATGCCGCCTTGGCAGCAGTTCTCAGTGTGGGCGGTAATGTGGTGTTGCA
GCAAAAATTCGATGGTCACATGCGTGGAGTGCTCTATTGGGCATAAATAG
CCCATCCAAGCAACGGGTCACCCCTCTTTTTGGCCATGCCAATTGTCTAC
AAGCGTCTGATTGTCGAGTATGAAAAATGTTTGCCAAGGATTCGAGAATG
TTTGAGTACATTGTGATCATTGCCCGCCAAAGATACGATTGAAGGCGACA
GCTTTGCCTTGCTACCGGAATCGGGTCTTTACGAATGGCCGAAATACCGG
TCCAGAATATATACCGAATACTATGGGAATGGATGAAACCGGATATTGGT
TTTTG
FMO11847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18155-RB | 2047 | CG18155-RB | 115..1256 | 9..1153 | 5155 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7329590..7330440 | 276..1126 | 3555 | 97.1 | Plus |
| X | 23542271 | X | 7329316..7329508 | 85..277 | 965 | 100 | Plus |
| X | 23542271 | X | 7329160..7329238 | 9..87 | 395 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:17:13 has no hits.
FMO11847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:17 Download gff for
FMO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18155-RB | 1..1135 | 9..1144 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:01 Download gff for
FMO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18155-RB | 108..1249 | 1..1144 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:25 Download gff for
FMO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18155-RB | 108..1249 | 1..1144 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:25 Download gff for
FMO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7329153..7329237 | 1..86 | 96 | -> | Plus |
| X | 7329318..7329507 | 87..276 | 100 | -> | Plus |
| X | 7329591..7330457 | 277..1144 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:01 Download gff for
FMO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7223186..7223270 | 1..86 | 96 | -> | Plus |
| arm_X | 7223351..7223540 | 87..276 | 100 | -> | Plus |
| arm_X | 7223624..7224490 | 277..1144 | 96 | | Plus |
