FMO11854.5prime Sequence
1100 bp (844 high quality bases) assembled on 2012-06-25
> FMO11854.5prime
ATTTCCAGGAACGCGTTAGACACTCGCTAACGGTACTGGATGGTCCAACT
CGCGGATATCCCGCATCCGTGATGCCGCGCTACCAAATCGCTGCTCGCTG
AACCGCTCCCATTTGCCGATGCCAATAAGCAATACGCTGAGCGCTCTGGT
GAAGCCAGTATCGCCGAAAGTTGTATTTAAGAAAACGCTAACGGATGAGG
AAGCGGTAATCCGCTCGCTGGTGCGACGTTCAAAACCGCTGGCAGTTCGT
GGCAATCGTACATCCTTTCGCCGCATTCAATTGGCTCACGCTGCGCCAAT
TGACGATTCTTCCGTGCTGTTGAAAGCCACCAATAGCTTTTGCAGCACCA
ATTTTCAGCTGCAAAAGCCCATAAAGGAGGCAAGTCCGGGTGCCACAGAG
AAGGATCGTGCCGCTAACAAAGTGAGGTCCGCAAAAAGTCTGCTGGATCT
GGTGGCCGGAAGAAGGCAACCGGGTATGGAACAAATACGTTTCCTTTGCA
GCGATCATCGCCTGATCAATGTGCCCAGTCCCTTGATGTATCGCCATTCG
GAGGTGATGAGCCGTTTGGAAGGGGAGGTGCAGCCAATTCCGTTGCGGGT
CCATTCGATCGGCGACACTGCTACGTGTGATTATGTGGATGCACAATAAG
ACTCTATGCGCAAACGGAACTGAAAAAATCGCCGCGCCGACACCAACAGT
TGAGACGTGCATTTGCGAATAGGCAAAGGAAACGGATATACGTAAATGCG
AGGCCAGCTGTCAATCAGTGAGAACACTCAAGGTATTGCTCAACAAACGG
TAAAATTTTACTTGTCAGATCCTCGGCGAAAAAATCGAAAATGGATTCAC
AAAATACTTAGAATGTAGATTTTGATTATGACCATACCACCGATATAAAT
GATAATATCGAGAATAGTTGTGGAAAACATGATGAATGTGGTTAATGACA
AGGCAGGGTTTTAAGCCATCAACCAGCGACTCATGGAAAGTTTCGAAAAT
ACTTGCAAATCAGAAAATTTTTATGGTCGAATGTTTCTACGATATCCGAT
TGTATGATATACAACCAAACGAAAATCTAAAGACGAAGAACTTGCCACAT
FMO11854.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4661-RA | 2035 | CG4661-RA | 93..1183 | 8..1092 | 4525 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12856597..12857630 | 1035..8 | 4100 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:18:12 has no hits.
FMO11854.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:29 Download gff for
FMO11854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4661-RA | 87..1144 | 1..1054 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:38 Download gff for
FMO11854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4661-RA | 87..1144 | 1..1054 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:57 Download gff for
FMO11854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4661-RA | 87..1144 | 1..1054 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:57 Download gff for
FMO11854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12856579..12857635 | 1..1054 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:38 Download gff for
FMO11854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12750612..12751668 | 1..1054 | 96 | | Minus |
