FMO11855.5prime Sequence
916 bp (872 high quality bases) assembled on 2012-06-25
> FMO11855.5prime
GGGTTTTTCCTTTTCTGTTTAGCCCTTGGATTAATGCTGAATTTGAGTCA
GCAGGCTTCACTTTTCAAGAGAGATTTCTATACAGCTGGTGTGGTGGAGT
TTGAGCCATCCAATGAATTGTCCGACAATCTAGCTGGCTATTTGGAGATA
ATCCAGTCGCAGAATGCCACTTCTACGGACATCATTGTGTTCCCCGAGAG
CACACTGAACTCCGCGGGTTCCACGACCTTTGTGCCCAATCCCGAGGATC
AGATAAACCCCTGTTTGAGTGATCCCAATGCCACCTACTATGAGGAGTTT
CTGGTGACCCTGTCGTGTGCGGCCCGCAATGCCAGTAAATACATTGTGTT
CAATCTGACCGAGAAGCAGAAGTGCGAGGATATTCCCGAGGATACGAGGC
CATGTGCATCTAACGGACTGAATGTTTTCAACACCAATGTAGTGTTCGAT
CGTCAGGGAGTGGTGGTGTCCAGGTACCGAAAGGTTCATCTCTATGGTGA
GCCCAAGAACAGCACTTTTCTGCCGGAACTGAGCACCTTCGAGACAGACT
TTGGGGTCACCTTCGGTCATTTTATCTGTTTCGACATCCTGTTCTATACT
CCCGCCCCATCAACTCATCGTGGAGCAGGGTATTACGGACTTCGTGTATC
CGGCCATGTGGTTCTCCCAACTGCCCTTCCTCACAGCTGTTTCAAATTCA
GCTGGTTTGGTCCTATGCCAACAATGTGAATTTGCTGGCTGCTGGAGCAA
AGTGATCCCATTGTTGGAAATATGGATCGGGCATTATCACGGACGCAGTG
GCTCACTTAAAAATGTGATGCGGCAAGGAGTCCGGTGAAAAAAAGTATAT
ATGTGGCCCGGGTACCCAAATACAGGGCCAAAAGGCGGATGAAACCGAGA
TCTCCAAACGTCAAGT
FMO11855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32751-RA | 1603 | CG32751-RA | 55..965 | 1..916 | 4245 | 98.1 | Plus |
| CG32751-RB | 1758 | CG32751-RB | 55..989 | 1..916 | 4005 | 95.7 | Plus |
| vanin-like-RA | 1864 | CG32754-RA | 180..841 | 133..795 | 2450 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6197860..6198493 | 686..52 | 3110 | 99.7 | Minus |
| X | 23542271 | X | 6201766..6202316 | 684..133 | 2290 | 94.7 | Minus |
| X | 23542271 | X | 6197423..6197624 | 893..691 | 685 | 94.6 | Minus |
| X | 23542271 | X | 6198546..6198600 | 55..1 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:18:15 has no hits.
FMO11855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:29 Download gff for
FMO11855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 55..965 | 1..916 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:41 Download gff for
FMO11855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 55..965 | 1..916 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:00 Download gff for
FMO11855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 55..965 | 1..916 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:00 Download gff for
FMO11855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6197402..6197627 | 687..916 | 93 | <- | Minus |
| X | 6197860..6198490 | 55..686 | 99 | <- | Minus |
| X | 6198547..6198600 | 1..54 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:41 Download gff for
FMO11855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6091435..6091660 | 687..916 | 93 | <- | Minus |
| arm_X | 6091893..6092523 | 55..686 | 99 | <- | Minus |
| arm_X | 6092580..6092633 | 1..54 | 100 | | Minus |
