FMO11857.5prime Sequence
1151 bp (1041 high quality bases) assembled on 2012-06-25
> FMO11857.5prime
CAGTCGACATGGGTAATGCACAGGGACAGAACGGCTTCGAGGAACTCCGG
CGATATGTGAAGCAGGGCGGTGATTTTAGCAAGGAGCTCATCTTTGTCCT
GCAGGAGAGAGCCGATTCGGAGCTGATCTACTCCAAGTCGCTATCGAAAC
TGGCCAACAAGCTGAACAAAGCGGGCAGGGAAATTCCCGGGAGCGTGGCC
GACGCCTGGCGTGGAGTGGCTACGGAGATGGAGAGCCGCAGCGACATCCA
TCGCCAGTTGGCAGCCTCGCTAACGGATGAGCTGGTCAAGCCGCTCAAGA
TCGTCGTCGAAGGACATCACAAGGCGCGCAAGGCGGTGGAAAGCAACGTG
GACAAGGCGGCGCGAGTACTGGGCGAATGGCGAGCCAGCGAGGCGAAAGC
CAAGAAGGCCTCCCATACGGCGGCGCGCGAGAACGAGAAGCTGCAGGACG
CAATGCTGGACGTGCGCATCCAGAAGTCACCATCGATTGCCCTGCTCCAC
CAGGGACCCAACAAGCAGGCCGCAGAAAAGGAGCTCAAGTCAGCGGAGAA
GGATTGCGTCAAGCTGGATAACAAGCGCAAGAAGGCCGAGGAGGCGGTGA
AGCGTGCGGATGTGGAATACTACACCCTGTGCGTGCGTTCGGAGCGAGCA
CGCGTAGACTGGGAGATGGCCGTGCTCCGGGGAAGTGCCCAACTGCAGAG
CAGCGAACAGCAGCGGCTGGGCAATATGCACAACTTTGCCCAGCAGTATG
CACGCCTCATCTCGGACATGAATCCGATACTCGGTGGCCTGAGCACACGC
CTGCAGCCGCAACTCGATGCTTGCAATGTGGCTAAGGATATGCAAGTGGT
GCGCCACATCCGCCGCAATTCGGAGGGACCCAGTGAGCAACTCCTACCGG
ACTTTTACTGCGAACACACCACGCTGGCCATGAATCGGGAGCGTCGCAAG
CACGCTCTGATCAGCTGCTGCAGCTGGTCAAGACGATTTGGAGCGGGGAG
CGACGATCCCGCGACGATTGAGGGACTGTCGCCAATCCGCTTAACCATCA
GGAGCATCAGAACATCACCGAATAAGCTGTACCTCAATCCGTCAATGCTG
ACCTATTGGAAGGCGCCCATTCTCAGCCTGAACTCCTGCCTCTCTTGGAA
C
FMO11857.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42388-RC | 3014 | CG42388-RC | 957..2095 | 9..1149 | 5265 | 98 | Plus |
CG42388-RF | 2508 | CG42388-RF | 451..1589 | 9..1149 | 5265 | 98 | Plus |
CG42388-RG | 5133 | CG42388-RG | 1833..2958 | 22..1149 | 5200 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9051467..9052215 | 335..1083 | 3355 | 98.5 | Plus |
X | 23542271 | X | 9051183..9051412 | 108..337 | 1150 | 100 | Plus |
X | 23542271 | X | 9051033..9051122 | 20..109 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:18:22 has no hits.
FMO11857.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:31 Download gff for
FMO11857.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42388-RC | 952..2073 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:47 Download gff for
FMO11857.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42388-RF | 446..1567 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:04 Download gff for
FMO11857.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42388-RF | 446..1567 | 1..1125 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:04 Download gff for
FMO11857.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9051030..9051122 | 14..109 | 96 | -> | Plus |
X | 9051185..9051410 | 110..335 | 100 | -> | Plus |
X | 9051468..9052210 | 336..1080 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:47 Download gff for
FMO11857.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8945063..8945155 | 14..109 | 96 | -> | Plus |
arm_X | 8945218..8945443 | 110..335 | 100 | -> | Plus |
arm_X | 8945501..8946243 | 336..1080 | 98 | -> | Plus |