FMO11860.5prime Sequence
1112 bp (1035 high quality bases) assembled on 2012-06-25
> FMO11860.5prime
CAGTCGACATGGACTTGGTGGACATTGATCAGGTTTTGGACAATCTGGAA
CTGAGCATTGCCGCCGATGAGCAGCTGAGTAGAAATGCAGCGGCAGCAGC
AGCTGCAGGTGCAAATCCTGGCCGTTTTCTGGGCGACGGAGCAAGTGCAT
CGATCAGTGGAGTTGGAGCTGGCGCCGGAGTATCGGGAGCTGCGGGAGTA
ACACCAACACCGGCGTCTGGAAAGTCCTTTGTGGGCGTCTCTCAGGTTTT
CAACAGCCTGGATGACTACAGGGAAAATGTGAAGTCCTTGCAGGTGGATG
CCCAATTACCCAGCTACGACTGGCAAACGGAGGCGGAACACGAAGACGAC
ATCCACAAGTTCAGCGAACAGGCGTCCAAAAATAACGGCCAGACGATAGT
ATCGTCCTCCGAATCGCTGACCACCTCATCCTGTTCCACCTTCTCGTCGG
GTCCGTCGCCCGTGAGCAATGGCAGTCACTCGGAGGAGCTAGCAACGCCC
CCCGAAGATGAGAAAACGAGTGAAGTTCAGGTGGAGCCAAAGGAACAGGA
TCAACAGCCGGAACAGGTCAAGCATGAGGACCAGCACCAAGATCAGGCTG
TTCCACCGCCAACGCAATCCAAACAAACTGTAGAGGAGTTAGCAGTTGGA
TTGTCATCCATCTCCATCACTGCGTCCGGCACAGAATCGCAATCCCTATT
GCCGGAGGAGGTCACCGCATCGTCTGTTCTCGGGCAGTCCTCGAGGAGCT
CTCGGAGGAATCGTCGCCCAGTAGAGAACCCGAAACCGAAATGACCAACG
GCATAGATGTCCCATTGGCCAATTTACCAGCATCTGTTGCGGAAGTACCG
GTCCCTAAAGAGATGGAGCAGCCAGTACAAACGGAAGAGAGGATGTGAGC
TGCCACAGGAGCAGCATCCCAGCGTAGTCACCGTTGACCTTCTGCTCCAC
CATGACGAGATCCTCGGACACGAACTGGACGCATGCTGCAAGAGATGGAT
GCAGATGACACCAGCGGACGATCAGCAAATGCCCGACGATGAGAATCCTG
CTCCGCCTCGCCAGTGACCGAGGAGGGATTTGTGCGATCCTATCGAGTGG
CCAGAGAAACAC
FMO11860.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sara-RA | 4621 | CG15667-RA | 187..1265 | 8..1076 | 5100 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21482224..21483043 | 8..826 | 4050 | 99.9 | Plus |
2R | 25286936 | 2R | 21483193..21483451 | 827..1076 | 755 | 95 | Plus |
Blast to na_te.dros performed 2014-11-28 03:17:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1c | 5443 | Rt1c RT1C 5443bp | 4304..4384 | 128..206 | 147 | 67.9 | Plus |
FMO11860.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:25 Download gff for
FMO11860.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sara-RB | 85..1180 | 1..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:27 Download gff for
FMO11860.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sara-RA | 180..1275 | 1..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:53:49 Download gff for
FMO11860.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sara-RA | 180..1275 | 1..1086 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:53:49 Download gff for
FMO11860.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21483193..21483476 | 827..1097 | 93 | -> | Plus |
2R | 21482217..21483043 | 1..826 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:27 Download gff for
FMO11860.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17369722..17370548 | 1..826 | 99 | -> | Plus |
arm_2R | 17370698..17370981 | 827..1097 | 93 | -> | Plus |