FMO11862.5prime Sequence
275 bp (275 high quality bases) assembled on 2012-06-25
> FMO11862.5prime
CAGTCGACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGTCCCGCTCG
CAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACCTCAGCAAG
TTGTCGAAAAGTGGTAAAAAACCCAGCTGGATTGTCCGAATTTGACCAGT
GCTCGATGCTTTGGCCGTTCGCAGTCTGCCGCATTCCTGCTAGGCGTCCC
ACCCGCCCAGGATTCCTCAACCCAGGGCCATTGGGAGAGGATCCGTCGCT
AACAGAAGCAAGCTTTCTAGACCAT
FMO11862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 104..47 | 230 | 93.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15836523..15836670 | 110..257 | 740 | 100 | Plus |
X | 23542271 | X | 15836295..15836397 | 9..111 | 515 | 100 | Plus |
X | 23542271 | X | 15946096..15946153 | 104..47 | 230 | 93.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:18:38 has no hits.
FMO11862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:33 Download gff for
FMO11862.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RB | 127..388 | 2..269 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:55 Download gff for
FMO11862.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RB | 105..366 | 2..269 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 03:54:11 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:11 Download gff for
FMO11862.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15836292..15836397 | 2..111 | 96 | -> | Plus |
X | 15836525..15836674 | 112..262 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:55 Download gff for
FMO11862.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15730325..15730430 | 2..111 | 96 | -> | Plus |
arm_X | 15730558..15730707 | 112..262 | 98 | | Plus |