FMO11863.5prime Sequence
584 bp (584 high quality bases) assembled on 2012-06-25
> FMO11863.5prime
ATATTATCCTCCTGGGTGACAGCGGCGTAGGCAAAACCTGCCTGCTGATG
CGTTTCTCGGATAACCAATTCACCACAATACACCGGAGCACTGTGGGCTT
GGATAGAAGGGAGTGCAGCGTGGAGTTTGCCGATTGGAGGATGGGGAGGA
TGCTGCAAGTCTGGGACACCTCCGACGACGAGCGCTTCAAATTGCTGAAG
GCGACCCAATGTCGCAGTGCCCATGGCATACTGCTCGTCTACGACATAAC
GTCGTCCAAAAGTTTCCAAAACATCGATGGCTGGATGAAGGAGATACGGC
GCCTGTGTCCGGATAAGGTAATTGTCCTGCTGGTGGGCAACAAAAGTGAT
GATCCGAACCATCGCCAGGTGAGCATGGCGCAGGGGTTCAACTATGCCCA
TCGTCAGTCTATCTGCTTTGAAGAGGTTTCCGCCAAGAGTGGAAGGAATG
TATATGACATATTTAGCTCGTTGGCAATGGACATATATACATATCGTCGT
GTACATTACAACCCGTTCAGCTTGACATCTTGGCAGGAAGAGGAGGACGC
TGCAGAGTCACTGGATGCAAGCTTTCTAGACCAT
FMO11863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab9D-RA | 897 | CG32678-RA | 121..684 | 3..566 | 2790 | 99.6 | Plus |
| Rab9E-RA | 889 | CG32673-RA | 113..676 | 3..566 | 2715 | 98.8 | Plus |
| Rab9Fa-RA | 871 | CG32671-RA | 95..658 | 3..566 | 2715 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10589209..10589772 | 3..566 | 2790 | 99.6 | Plus |
| X | 23542271 | X | 10661168..10661731 | 566..3 | 2715 | 98.8 | Minus |
| X | 23542271 | X | 10950373..10950936 | 566..3 | 2715 | 98.8 | Minus |
| X | 23542271 | X | 10622568..10623131 | 566..3 | 2640 | 97.9 | Minus |
| X | 23542271 | X | 10417530..10418080 | 10..566 | 1540 | 86.2 | Plus |
| X | 23542271 | X | 10951938..10952392 | 463..3 | 950 | 80.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:18:41 has no hits.
FMO11863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:34 Download gff for
FMO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9D-RA | 119..687 | 1..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:57 Download gff for
FMO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9D-RA | 119..687 | 1..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:14 Download gff for
FMO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9D-RA | 119..687 | 1..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:14 Download gff for
FMO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10589207..10589775 | 1..570 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:57 Download gff for
FMO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10483240..10483808 | 1..570 | 99 | | Plus |
