FMO11864.5prime Sequence
605 bp (605 high quality bases) assembled on 2012-06-25
> FMO11864.5prime
CAGTCGACATGGGCTCGTGCTCGTGTACGCGGCGACACTTTTTGCTGTCA
ATATGCTTCCTGCAAGTGATAACGATTATCGAGCGCCAGGTATTCGACTT
CCTCGGCTACATGTGGGCGCCTATCCTAGTGAACTTTTTCCACATTTTGT
TCATCATATTCGGGTTTTACGGCGCCTACCACTTTCGCGTTAAATACATC
ATCACCTATCTAATATGGAACTTCCTGTGGATCGGGTGGAATACCTTCCT
CATTTGCTTCTACTTAAATGTGGGGCAGTTGAACAGGGACAGTGACCTGC
TCAACCTGGGCACTGGCAGCGTCTCCTGGTTCGAGGCGAATGGGTACGGT
TGCAAGCCCACCTATAACATGGCCGCGGACGATACGTTCCGTCCCCAGCG
GCCGGAGCGCGTGGAAGGCTGCCTGCTGGACTACCCGCTGGTGGAGATCA
CCCACTCGGGGGTACAGTGCGCTCTGGCGCTGCTCGGCATACTCGGTGCG
ATTCTGATTAGTTGCATATTTCTTGACGAGGACGACAGATGTAAGTGGCG
CTCTCTGAATGCGAATAAGAAACATGCTCGCCTGTCAGCAAGCTTTCTAG
ACCAT
FMO11864.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-RI | 1571 | CG34413-RI | 387..965 | 9..587 | 2895 | 100 | Plus |
| NKAIN-RL | 2366 | CG34413-RL | 387..918 | 9..540 | 2660 | 100 | Plus |
| NKAIN-RJ | 2311 | CG34413-RJ | 387..918 | 9..540 | 2660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24883420..24883612 | 287..479 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 24883076..24883214 | 68..206 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 24883673..24883781 | 479..587 | 545 | 100 | Plus |
| 2R | 25286936 | 2R | 24883278..24883359 | 207..288 | 410 | 100 | Plus |
| 2R | 25286936 | 2R | 24882960..24883019 | 9..68 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:18:45 has no hits.
FMO11864.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:35 Download gff for
FMO11864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 402..986 | 3..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:00 Download gff for
FMO11864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 384..968 | 3..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:16 Download gff for
FMO11864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 384..968 | 3..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:16 Download gff for
FMO11864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24882957..24883019 | 3..68 | 95 | -> | Plus |
| 2R | 24883077..24883214 | 69..206 | 100 | -> | Plus |
| 2R | 24883278..24883358 | 207..287 | 100 | -> | Plus |
| 2R | 24883421..24883612 | 288..479 | 100 | -> | Plus |
| 2R | 24883674..24883784 | 480..591 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:00 Download gff for
FMO11864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20770480..20770542 | 3..68 | 95 | -> | Plus |
| arm_2R | 20770600..20770737 | 69..206 | 100 | -> | Plus |
| arm_2R | 20770801..20770881 | 207..287 | 100 | -> | Plus |
| arm_2R | 20770944..20771135 | 288..479 | 100 | -> | Plus |
| arm_2R | 20771197..20771307 | 480..591 | 98 | | Plus |
