Clone FMO11867 Report

Search the DGRC for FMO11867

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptBG4-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11867.5prime Sequence

604 bp (604 high quality bases) assembled on 2012-06-25

> FMO11867.5prime
ATACGAACCATCGAGGATTTAATTGACTGCCTGGAACGAGCGGACGAACT
ATCGGAGTACAATGTGGAGCCACTGCGCCGGATATCAGGCAATATGCCAC
AGCTCATCGAGGCTCTGAGCGCCTACACAAAGCCGGAAAACATTCTTGGA
CATCCGGTTAATCTGTACCAGGAACTCCGATTGGCCGAGGAACTTCGTCA
GCAGCTCCGTATTGCTCCAGCTTCCCAGAATGCTCAGCCATCAGTTTCGG
AATTAGCTGCCGCTGTGCCTCCAACAGCAATCCAAAACTATGCCACCCCA
GCTGCTTTTACGGATCACAAACGAACGATGGTCTTTAAGAAAATATCCGA
GGAACTGGGTCGCTATTGGCGACGACTGGGCCGATCGGCGGGCATTGGCG
AGGGCCAAATGGACACAATCGAGGAGCGCTACCCGCACGACTTGAAGTCC
CAGATTCTGCGACTGCTGCAGCTCATCGAAGAGGATGATTGCCACGATCC
CAAGCACTTTCTGCTTCGTCTGTGTCGCGCCCTGAGCGATTGTGGTCGCA
ATGATCTGCGCAAGAGGGTGGAGCAGATATGTCGCACGCAGCTTTCTAGA
CCAT

FMO11867.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
Fadd-RA 1163 CG12297-RA 238..825 1..587 2900 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22034692..22035270 1..579 2880 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 03:18:56 has no hits.

FMO11867.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:37 Download gff for FMO11867.5prime
Subject Subject Range Query Range Percent Splice Strand
BG4-RA 211..801 1..591 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:07 Download gff for FMO11867.5prime
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 238..828 1..591 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:20 Download gff for FMO11867.5prime
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 238..828 1..591 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:20 Download gff for FMO11867.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22034692..22035282 1..591 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:07 Download gff for FMO11867.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17860414..17861004 1..591 99   Plus