FMO11868.5prime Sequence
785 bp (-60 high quality bases) assembled on 2012-06-25
> FMO11868.5prime
CCGCGGCTTTGGCCCTGGTGGCCGCCTCCCCGACCGGTCTGAACCGCACC
ACCCTCCTGTCCCAGGGAGCCGAGGGTCGCATTGTCAACGGCTACCCAGC
GCCCGAGGGCAAGGCTCCCTACATTGTGGGCCTGTTCATCCGTACCGATG
GAAGCAACAGTGGTGCCGTTGGTGCTGGTACCATCATTGCCAACGACTGG
ATCCTGACTGCCGCCCATTGCTTGACCGGAGACTACGTGGAGATCCACTA
CGGATCCAACTGGGGCTGGAACGGTGCCTACAGGCAGACCGTCCGTCGCG
ACAACTTCATTAGCCACCCCGACTGGCCTTCCCAGGGCGGCCGAGACATT
GGTCTGATCCGCACTCCCCATGTCGACTTCAACGGACTGATCAACAAGAT
CCCTCTGCCAAGCATGAACGAGCAGAACGACCGCTACCAGGACACCTGGT
GCGTCGCTTGCGGATGGGGTGGTATGGACAACGGAAACCTGGCCGACTGG
CTGCAGTGCGTCGATGTCCAGATCATCAGCAACAGCGAGTGCGAGCAGGC
CTACGGCTCGGTTGCCAGTACCGACATGTGCACCCGTCACGCCGACGGAA
AGTCCGTGTGCGGAGGTGACTCCGGTGGCCCCCTGGTTACACACGACAAT
GCTCGTCTCGTCAGTGTGATCACCTTTGCCTCCGTCAGCTGCCACGACGG
ACCCTCTGGCTACACCCGCGTCTCGGACTACCTAGAATGGATCCGCGACA
AGACTGGCATCTCCTACGCAAGCTTTCTAGACCAT
FMO11868.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18180-RA | 901 | CG18180-RA | 45..811 | 1..767 | 3805 | 99.7 | Plus |
| CG18179-RA | 870 | CG18179-RA | 115..822 | 60..767 | 1680 | 82.7 | Plus |
| CG8329-RA | 910 | CG8329-RA | 469..774 | 447..752 | 375 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9641057..9641823 | 1..767 | 3805 | 99.7 | Plus |
| 3L | 28110227 | 3L | 9639385..9640092 | 60..767 | 1680 | 82.5 | Plus |
| 3L | 28110227 | 3L | 9638580..9638885 | 447..752 | 360 | 74.5 | Plus |
| 2L | 23513712 | 2L | 4950101..4950299 | 647..452 | 285 | 77.4 | Minus |
| 3R | 32079331 | 3R | 30489091..30489152 | 73..134 | 190 | 87.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:19:00 has no hits.
FMO11868.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:37 Download gff for
FMO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18180-RA | 42..813 | 1..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:09 Download gff for
FMO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18180-RA | 45..816 | 1..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:22 Download gff for
FMO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18180-RA | 45..816 | 1..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:22 Download gff for
FMO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9641057..9641828 | 1..775 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:09 Download gff for
FMO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9634157..9634928 | 1..775 | 99 | | Plus |
