FMO11870.5prime Sequence
241 bp (-60 high quality bases) assembled on 2012-06-25
> FMO11870.5prime
CCCAAGAAGCTGCCGTGATCAACCAGCGTCTGTACTTCGACATTGGGAAC
TCTGTACGAAAGCTTTGCCAAATACTACTATCCCCTTTTCCGCACTGGAA
AGCCCGGATCGGATGAGGACTTGAAGAGAATCGAAACCGCGTTTGGATTT
CTCGACACCTTCCTGGAGGGCCAGGATTATGTGGCTGGCGACCAGCTCAC
CGTGGCGGACATTGCCATCCTGTCCACTGTCTCCACGTTCG
FMO11870.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstD2-RA | 734 | CG4181-RA | 286..526 | 1..241 | 1145 | 98.8 | Plus |
GstD5-RA | 840 | CG12242-RA | 290..530 | 1..241 | 575 | 83.1 | Plus |
GstD1-RB | 843 | CG10045-RB | 350..429 | 1..80 | 235 | 87.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12372256..12372496 | 1..241 | 1095 | 98.8 | Plus |
3R | 32079331 | 3R | 12376041..12376262 | 19..241 | 540 | 83.9 | Plus |
3R | 32079331 | 3R | 12374541..12374651 | 131..241 | 210 | 79.3 | Plus |
3R | 32079331 | 3R | 12378952..12379051 | 137..236 | 200 | 80 | Plus |
3R | 32079331 | 3R | 12373494..12373574 | 155..235 | 195 | 82.7 | Plus |
3R | 32079331 | 3R | 12380447..12380509 | 154..216 | 195 | 87.3 | Plus |
3R | 32079331 | 3R | 12368231..12368298 | 80..12 | 190 | 88.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:18:26 has no hits.
FMO11870.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:31 Download gff for
FMO11870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstD2-RA | 286..526 | 1..241 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:49 Download gff for
FMO11870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstD2-RA | 286..526 | 1..241 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:06 Download gff for
FMO11870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstD2-RA | 286..526 | 1..241 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:06 Download gff for
FMO11870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12372256..12372496 | 1..241 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:49 Download gff for
FMO11870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8197978..8198218 | 1..241 | 98 | | Plus |