FMO11871.5prime Sequence
710 bp (710 high quality bases) assembled on 2012-06-25
> FMO11871.5prime
CAGTCGACATGTCCAAGCCAATTAGATTCTATTACGATTTGTTGTCCCCG
ATCGCCCGTGGTCTATGGATTGGTTTAAAATTCAGCAACTCACCCGTTGA
GTATTGCCCGATTGCCCTGCGAAAATTTGAGCAATTGACCGACGAGTACA
AGAAGATCAATCGATTCCAGAAGGTGCCCGCCATTGTGGGTGGGGACTTC
CATTTGTCTGAGACCATAGCGATTATAAGATATCTCGCAGACAAAGGTCA
GTTCGATGAGAAGCTCTACCCAAAGACGCTGGAGAACCGTGCCCGAGTGG
ATGAGTTCCTTGAGTGGCAACACCTGAACATTCGTCTTGCATGTTCCATG
TACTTTCGAGATGCCTGGCTGTTTCCCATGAACGGGATAGCGCCCAAGCC
CAAGCCAGAGCAGATTCAAGCACTGATTGAGGGAGTGGAAAACAATCTGG
GTTTACTGGAGCGCCTGTGGCTGGAAAATGATTTTTTGGTTGGGAAAAAC
CTGACAATGGCTGATATCCTTGGCTCTTCCGAAATCAACCAGCTGAGGCT
CTGCCAATACAGAGTGGACGAGAAAAAGTTCCCAAAGGTGGTCAAATGGT
TGGAACGCGTAAGGGTATCCGCAAATCCCTACCATGACGAGGGACTGACT
TTTATTGACCGAAAATCTAAGCAATCGACGGCGGCAAAGTTGGCAAGCTT
TCTAGACCAT
FMO11871.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT2-RA | 887 | CG30005-RA | 75..759 | 8..692 | 3425 | 100 | Plus |
CG12926-RA | 1347 | CG12926-RA | 1253..1347 | 692..598 | 475 | 100 | Minus |
GstT1-RA | 997 | CG30000-RA | 196..701 | 105..610 | 335 | 72.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9607699..9608018 | 228..547 | 1600 | 100 | Plus |
2R | 25286936 | 2R | 9608077..9608222 | 547..692 | 730 | 100 | Plus |
2R | 25286936 | 2R | 9607366..9607489 | 8..131 | 605 | 99.2 | Plus |
2R | 25286936 | 2R | 9607536..9607642 | 127..233 | 520 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:18:29 has no hits.
FMO11871.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:32 Download gff for
FMO11871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30005-RA | 72..763 | 1..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:50 Download gff for
FMO11871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT2-RA | 72..763 | 1..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:09 Download gff for
FMO11871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT2-RA | 72..763 | 1..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:09 Download gff for
FMO11871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9607363..9607484 | 1..126 | 96 | -> | Plus |
2R | 9607536..9607638 | 127..229 | 100 | -> | Plus |
2R | 9607701..9608017 | 230..546 | 100 | -> | Plus |
2R | 9608077..9608226 | 547..697 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:50 Download gff for
FMO11871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5495582..5495731 | 547..697 | 98 | | Plus |
arm_2R | 5494868..5494989 | 1..126 | 96 | -> | Plus |
arm_2R | 5495041..5495143 | 127..229 | 100 | -> | Plus |
arm_2R | 5495206..5495522 | 230..546 | 100 | -> | Plus |