Clone FMO11873 Report

Search the DGRC for FMO11873

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14397-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11873.5prime Sequence

347 bp (347 high quality bases) assembled on 2012-06-25

> FMO11873.5prime
CAGTCGACATGTGCCTCCTGCCCGGTCGCTTCTTCTGGTCAGCTTTCATT
GTGACGATGGTGGGTCTATCCGCAACGATCGAAGCTAGACCCCAGAGGAA
TCTGCAGCACATCGCCGTGGTGGAGAATGCCGCCTGGGAAAAGACCCTTC
CGCAGCAGTTCCAGAACCCCTTCTACAATACCCCAAGGGTGAGAGATGCC
CTGGCCAGATCCAGTTGGTTTGGACCCGGCGAGGAGGTGGTTTATGACCG
CCAGGCTGAAAAAATTCCTCGCATGGAAATCTACAATGTGTTGTCTCATG
CTGGTTTGATACCACGCCGGCGTTTTCTTGCAAGCTTTCTAGACCAT

FMO11873.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14397-RA 533 CG14397-RA 141..461 9..329 1605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21094409..21094639 11..241 1155 100 Plus
2L 23513712 2L 21094702..21094792 239..329 455 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:19:15 has no hits.

FMO11873.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:40 Download gff for FMO11873.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14397-RA 127..453 9..337 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:18 Download gff for FMO11873.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14397-RA 141..467 9..337 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:27 Download gff for FMO11873.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14397-RA 141..467 9..337 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:27 Download gff for FMO11873.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21094400..21094637 1..239 97 -> Plus
2L 21094703..21094798 240..337 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:18 Download gff for FMO11873.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21094400..21094637 1..239 97 -> Plus
arm_2L 21094703..21094798 240..337 95   Plus