FMO11875.5prime Sequence
434 bp (434 high quality bases) assembled on 2012-06-25
> FMO11875.5prime
ACATTGTTCTTCAAGCCCACAATTTATATCGGGCCAAGCATGGTGCTCAA
CCCTTGACTTTGAGTCCCAAACTGAATCTATTGGCCACGGAATGGGCCAA
TTATTTGCTGTCCAGAAATCGCATGGAACATCGACAGAACAGTGGATATG
GTGAGAACATTTACATGGCCTCCGGGGGAAATCTGAAAGGTGCCGATGCC
GTCAGATCCTGGTACGAAGAGATTCGACAGTACAATTGTAATTCTCCGTC
GTTTCAAGGTAACACCGGCCATTTCACTCAGGTGGTCTGGAAGAGCTCCA
CCGAGCTAGGCGTGGGTTTTGCGAAGAGTGGCAGTACCATCTATGTTGTG
TGCAACTACAATCCCCCTGGCAACTACAACAACTTGGTCAGGGAGAATGT
CGCACCCCCAATGCAAGCAAGCTTTCTAGACCAT
FMO11875.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16995-RA | 721 | CG16995-RA | 107..517 | 6..416 | 2010 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2308305..2308531 | 102..328 | 1120 | 99.6 | Plus |
2L | 23513712 | 2L | 2308154..2308249 | 6..101 | 465 | 99 | Plus |
2L | 23513712 | 2L | 2308579..2308668 | 327..416 | 435 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:19:21 has no hits.
FMO11875.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:42 Download gff for
FMO11875.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16995-RA | 103..520 | 1..417 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:21 Download gff for
FMO11875.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16995-RA | 103..517 | 1..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:30 Download gff for
FMO11875.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16995-RA | 103..517 | 1..416 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:30 Download gff for
FMO11875.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2308150..2308249 | 1..101 | 96 | -> | Plus |
2L | 2308305..2308531 | 102..328 | 99 | -> | Plus |
2L | 2308581..2308668 | 329..416 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:21 Download gff for
FMO11875.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2308150..2308249 | 1..101 | 96 | -> | Plus |
arm_2L | 2308305..2308531 | 102..328 | 99 | -> | Plus |
arm_2L | 2308581..2308668 | 329..416 | 98 | | Plus |