FMO11879.5prime Sequence
558 bp (558 high quality bases) assembled on 2012-06-25
> FMO11879.5prime
CCCATGTCTGGGCCACAAATGATGCAGGTAATGCAATCCTCGCCATCGGG
ACCCCCAGGACCAGTGCAGCATCAACAGCAGCAGCCTCCACAGCCACTGC
AGCAGCAGCAGCAGGCCGAAAAATTGGACAACATTTCCAGGGTGAAGAGT
TTGCTGGGACCACTGCGGGAGTCCATGTTCCTCACCATCCGGTCGAGCGC
CTTCGCGCTGCAGCAAAACAATCTCGCGGACAACTTAAAGAGGGACACGG
GTGCCCACCATGTTCCGCGGTTCGACAAGCACTTGGAAGACTTTTACGCC
TGTTGCGACCAGATCGAGATCCACTTGAAGACGGCGATGCATTGCCTCCA
GCAGCAGAACTCCTCCAATCACTATCTCCCCGGTCCGGTGACTCCCATGC
GCATGGAGACCTTTATGCCGGACAACGCCGGCCCCATTTCGTATCCCACT
TACTTGAACACGGTCCGCGTTCACATACAGTCCGCCAAGGATATACACGA
CACTCTGATTAGTGCCGCGCAGAACATTTCGCAGGCTGATGCAAGCTTTC
TAGACCAT
FMO11879.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ix-RA | 727 | CG13201-RA | 103..642 | 1..540 | 2685 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11359522..11360061 | 540..1 | 2685 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:19:31 has no hits.
FMO11879.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:44 Download gff for
FMO11879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ix-RA | 103..650 | 1..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:28 Download gff for
FMO11879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ix-RA | 103..650 | 1..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:37 Download gff for
FMO11879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ix-RA | 103..650 | 1..548 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:37 Download gff for
FMO11879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11359514..11360061 | 1..548 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:28 Download gff for
FMO11879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7247019..7247566 | 1..548 | 99 | | Minus |