Clone FMO11884 Report

Search the DGRC for FMO11884

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:84
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG16736-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11884.5prime Sequence

753 bp (737 high quality bases) assembled on 2012-06-25

> FMO11884.5prime
GCTCGATTAAAACTACGGCCCAACTGTTGTCGCATCCCATGGAGCTAGTT
CGTGTGAATATGCAGGCGAACGTAATCCACCATATCCGTTTAAGCATAAA
CCATATGTTCCGGCTGATGGCCCGTCATGGATTACCCGGATTTTATTACG
GCATTGTGGCTGCTTGTCTACGCTGTACTGTTCACACGATGTCAACGTAC
ACGTTGTTCTACAACTTACAGGATAACAAGTACGTCCTAATGCTGCAGCC
GTATAACACTAGCATGGTCCTGGGTATAACCGGATTTTGGGGCGGCGTAT
TGGCAACACCGTTCGCCAAGCTGGCGGTCATTCGGCAAGCTGATCTTACG
CGCGGATCCTACGAGAGGCGCAACTATCGAAATTTCTGGAGAGGACTCAA
ATGTATGTACGCGAAGGGAGGATTTACTTACCTATTTACCGGTTGGAAAA
TAAACTCGATTAGTAGCACAGCCGTGGCCGTGCTGTATACTCCTATTAGT
GATAAGGTCCATACAGTGATATCATGGTTCCACAGACTCGACGAGCCGTG
GCTTAGCGATCTCATAACTATGGCGCTAACAGGCAGTATTATCACAGTCA
TTATGACACCAGTGGATGCGTTGGCTACTCTAACGTTAAACGAATCCTCA
CACTATGGCCGCACTTCCTATCCCATATCTGTATCGGAAAATTATCCGAA
AACATGGCTACAAGGGCTCTTTTTTTGATGGAAACCGGCCACTAATGGCC
CTT

FMO11884.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG16736-RA 908 CG16736-RA 62..809 5..753 3630 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9257287..9257655 373..5 1815 99.5 Minus
3R 32079331 3R 9256788..9257166 753..374 1740 99 Minus
Blast to na_te.dros performed on 2014-11-28 03:19:11 has no hits.

FMO11884.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:40 Download gff for FMO11884.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16736-RA 59..809 1..753 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:16 Download gff for FMO11884.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16736-RA 59..809 1..753 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:25 Download gff for FMO11884.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16736-RA 59..809 1..753 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:25 Download gff for FMO11884.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9256788..9257166 374..753 98 <- Minus
3R 9257287..9257658 1..373 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:16 Download gff for FMO11884.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5082510..5082888 374..753 98 <- Minus
arm_3R 5083009..5083380 1..373 99   Minus