FMO11884.5prime Sequence
753 bp (737 high quality bases) assembled on 2012-06-25
> FMO11884.5prime
GCTCGATTAAAACTACGGCCCAACTGTTGTCGCATCCCATGGAGCTAGTT
CGTGTGAATATGCAGGCGAACGTAATCCACCATATCCGTTTAAGCATAAA
CCATATGTTCCGGCTGATGGCCCGTCATGGATTACCCGGATTTTATTACG
GCATTGTGGCTGCTTGTCTACGCTGTACTGTTCACACGATGTCAACGTAC
ACGTTGTTCTACAACTTACAGGATAACAAGTACGTCCTAATGCTGCAGCC
GTATAACACTAGCATGGTCCTGGGTATAACCGGATTTTGGGGCGGCGTAT
TGGCAACACCGTTCGCCAAGCTGGCGGTCATTCGGCAAGCTGATCTTACG
CGCGGATCCTACGAGAGGCGCAACTATCGAAATTTCTGGAGAGGACTCAA
ATGTATGTACGCGAAGGGAGGATTTACTTACCTATTTACCGGTTGGAAAA
TAAACTCGATTAGTAGCACAGCCGTGGCCGTGCTGTATACTCCTATTAGT
GATAAGGTCCATACAGTGATATCATGGTTCCACAGACTCGACGAGCCGTG
GCTTAGCGATCTCATAACTATGGCGCTAACAGGCAGTATTATCACAGTCA
TTATGACACCAGTGGATGCGTTGGCTACTCTAACGTTAAACGAATCCTCA
CACTATGGCCGCACTTCCTATCCCATATCTGTATCGGAAAATTATCCGAA
AACATGGCTACAAGGGCTCTTTTTTTGATGGAAACCGGCCACTAATGGCC
CTT
FMO11884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16736-RA | 908 | CG16736-RA | 62..809 | 5..753 | 3630 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9257287..9257655 | 373..5 | 1815 | 99.5 | Minus |
3R | 32079331 | 3R | 9256788..9257166 | 753..374 | 1740 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:19:11 has no hits.
FMO11884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:40 Download gff for
FMO11884.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16736-RA | 59..809 | 1..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:16 Download gff for
FMO11884.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16736-RA | 59..809 | 1..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:25 Download gff for
FMO11884.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16736-RA | 59..809 | 1..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:25 Download gff for
FMO11884.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9256788..9257166 | 374..753 | 98 | <- | Minus |
3R | 9257287..9257658 | 1..373 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:16 Download gff for
FMO11884.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5082510..5082888 | 374..753 | 98 | <- | Minus |
arm_3R | 5083009..5083380 | 1..373 | 99 | | Minus |