FMO11886.5prime Sequence
575 bp (575 high quality bases) assembled on 2012-06-25
> FMO11886.5prime
CAGTCGACATGGTCTCGCCCAAACGGAGACTAATCGACGATTCCATTGCT
CCCTCAGCTGCCGATCTCCAGCGGACATACGACGGACATGATGGGCCTCA
CGTTTTCGGAACACCCGGCAATCAAGTCTACATTCGGGGGCAGAACGATG
GCGTATACAAGGTGCCAGGAGTAGGTGGTCAGTTCCATCACGCATCGTCG
CCAGCAGATCACGTCTATACGGATGAGCAGGGGATCACGTATGTGCACAA
AAAAGACGCTGGAGGACCAGGAACACATACGCTTAGAGGACCAGGTCTAG
CTGCTGTACAGCCCGCCTACTCCACTGTGCAGCCTGCGGGACTTCGCAAT
CCCCAGTTTCATGTGGAGCGAAGTGGTCGCACTGTGGATGTTGGTTCTGG
AGGATTTGTCGTCCAAAGGAGCAGACGTAGTCCTCAGTTCCATGTGGAGC
GTCCTGGTCGCACTGTGGATGTGGGTTCCGGAGGATTTTTTGTCCAAAGG
GGCAGGCGTAGTCCCCAGTTTCCTGTGGAGCGACCTTGGCAAAGGGCTTT
GAAGGACGCAAGCTTTCTAGACCAT
FMO11886.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13749-RB | 897 | CG13749-RB | 75..624 | 8..557 | 2750 | 100 | Plus |
| CG13749-RB | 897 | CG13749-RB | 417..522 | 431..536 | 305 | 85.8 | Plus |
| CG13749-RB | 897 | CG13749-RB | 498..603 | 350..455 | 305 | 85.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8933817..8934105 | 269..557 | 1445 | 100 | Plus |
| 2R | 25286936 | 2R | 8933497..8933760 | 8..271 | 1320 | 100 | Plus |
| 2R | 25286936 | 2R | 8933898..8934003 | 431..536 | 305 | 85.8 | Plus |
| 2R | 25286936 | 2R | 8933979..8934084 | 350..455 | 305 | 85.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:19:46 has no hits.
FMO11886.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:47 Download gff for
FMO11886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13749-RB | 75..624 | 8..557 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:37 Download gff for
FMO11886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13749-RB | 75..624 | 8..557 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:44 Download gff for
FMO11886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13749-RB | 75..624 | 8..557 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:44 Download gff for
FMO11886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8933497..8933759 | 8..270 | 100 | -> | Plus |
| 2R | 8933819..8934105 | 271..557 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:37 Download gff for
FMO11886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4821002..4821264 | 8..270 | 100 | -> | Plus |
| arm_2R | 4821324..4821610 | 271..557 | 100 | | Plus |
