FMO11888.5prime Sequence
1031 bp (476 high quality bases) assembled on 2012-06-25
> FMO11888.5prime
CCTCCAGATTCCCGTATTCCTGTCGAAGAACCTGAGGGACAGCCTGTATC
TCTTTCAATACCCCACGAAAACGGAGCTCCCCAACCACGATGACTCCGTG
ATTGTCAATTGTTGTGTAAAACCAATCGCCCAGGAGGTGAAGGTGGACTT
CGGCCTGGACATTGAGTCGGCCCACTTCGATCGCTTCAAGGGCGAGCAAT
TTGCGGTGGCCGCCGACGGAAAGAACACCTATGGAGCAGTTCCACCAAAG
GGTCAGGAGCGACCCACCTACAAACGTGGCATCATGGACAAACAGGCCTT
CACAAGCTCGCGTTCCATAACCGATGTGGCCAAGTACATAGTGGGCATCT
TTACGGATCGGGAGGTGCATCTGTCGCCACTTACATCCATAGTCCAAATG
CGACCCGTTCTCAGTCACTTCGATAAGGACGACAAGCGCAAGAAGGCGGA
ACTGAAGGCTCAAACGGAGGACACGGACGATGACGAGGTGCTGCAGCAGG
TCACGGTTAATTTGCACGAGGAAATGCCAAAAACAGCGGAAAAGGAGCAA
CGTGTCGGCACCTACGACAGTTTCTTCCACCGAATTGCGGATGAGCCGTG
GTGCGAGGCCTACTGGCACTCGAGGGGGCACGCCCACCGCCCGAACTGGA
TCGCCAAAAGCTCTTTTGCCACCAGTCATCACGGCAGTTCCTCTTTGGCT
CTCGCTCCTGACGAATATCTTCAAAGCTTCTGCCCTAAGACGAGCTGTGC
GACGGTAGCCCCAGCAGCTGCTTCTGCTGCCGCCCAAGTACTTCCCGTCT
AAAACAAGGCCATGCTTAAGTCTATTCCCGCTGCTGGAAACTGCTACAGT
GCTACTGAAAAATGCGCGGATGCTCTCATTTAGTCGACGATAATTAGTAT
TCTCGCGAAGCCACTGGATTCCGTATGTGCATGCCGAAAAGGTGCTGGTC
TTGCTGGCCCAGGTGGCATTCTTACTGGCCGCAACTGGGTGCCCGAAATC
CGAGGTGGACCTTTCCCCGAAAAGGTGCTTT
FMO11888.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sin-RC | 1673 | CG10582-RC | 153..1174 | 4..1031 | 4240 | 95.4 | Plus |
| Sin-RA | 1614 | CG10582-RA | 96..1115 | 6..1031 | 4230 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21031977..21032998 | 4..1031 | 3845 | 94.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:19:53 has no hits.
FMO11888.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:48 Download gff for
FMO11888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sin-RC | 136..1039 | 1..907 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:42 Download gff for
FMO11888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sin-RC | 150..1053 | 1..907 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:47 Download gff for
FMO11888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sin-RC | 150..1053 | 1..907 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:47 Download gff for
FMO11888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21031974..21032877 | 1..907 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:42 Download gff for
FMO11888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21025074..21025977 | 1..907 | 97 | == | Plus |
