Clone FMO11889 Report

Search the DGRC for FMO11889

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:118
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9760-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11889.5prime Sequence

786 bp (784 high quality bases) assembled on 2012-06-25

> FMO11889.5prime
CCACCGCCTGCGGATCGCTGGCTCCGGCCCTCATCCCGCCAGCGCATATC
GTCATCCTGTGGTACTTCTGGGAGAACTATGCCCGCTACGTGGACAGGCA
CTTCTGCACCTGCTCCTGTTGGGACACCGTCTTCAAGGGACCCTACGAGT
CGGGCGTGGCGGCCTACAAGCATATGTACTTCAATGCCACGCCCAACAGC
TTCAAGATGTGGATTCTGACCGTGTTCGCCGTGATTGCCCTGTACGAGTG
CATCAAGAGGCTAATCGCCCTGATCCTCCAGCAGCGCGTACGGTACTCCA
TGCTGTTGCTTTTCCTGCTCTCGATATTTTCGCATTACTACGCCTGGTGG
GCGTACATCAACTACTACAACGATGACTACTACAATCAGTGGAACCACCA
GCTCTTCTTCACGGTAACCGAGTTGTTTTCAACGGTCCTAGTGATGCACC
TGGCCAACACCACCAACGTGGTCACGCCAAAGAAAGTCTTCTGCATTGTC
GGCATCGCCCTGCTGCACATCCTGGCCAGCAGTTTTGATCAGTTCTTCAT
GAATGTGGTGCGCGGCGAGGGTTACGCCCACCAGATAGTGCGAGACATCG
GGTTCATGGTGCCTGATCTTCTACAGCTCTTCGTCCCAGTTTGGCTGCTA
CGACAGACACGTCGCGAATGTTATACCACGCGACCCTTCCACCGAGATCG
GAAACTCCATCGGGAAATTGTGTTGATGCTGTGCCTGGTGTCGCTGCTCT
TTGTCATCTGCACGGATTTGGCAAGCTTTCTAGACC

FMO11889.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9760-RD 2039 CG9760-RD 360..1129 1..770 3820 99.7 Plus
CG9760-RC 2039 CG9760-RC 360..1129 1..770 3820 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12159144..12159560 417..1 2085 100 Minus
3L 28110227 3L 12157962..12158327 770..405 1770 98.9 Minus
Blast to na_te.dros performed on 2014-11-28 03:19:56 has no hits.

FMO11889.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:49 Download gff for FMO11889.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 360..1129 1..770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:44 Download gff for FMO11889.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 360..1129 1..770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:49 Download gff for FMO11889.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 360..1129 1..770 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:49 Download gff for FMO11889.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 12157962..12158318 414..770 99 <- Minus
3L 12159148..12159560 1..413 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:44 Download gff for FMO11889.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12151062..12151418 414..770 99 <- Minus
arm_3L 12152248..12152660 1..413 100   Minus