FMO11891.5prime Sequence
767 bp (767 high quality bases) assembled on 2012-06-25
> FMO11891.5prime
CAGTCGACATGTTCTTATTAAACATTCCTTGGAGTGGACACACTGGCCGC
ACGGCTTTTCACATTGTCATTTTCCAGGAGCTAGGCGTTGAAAATTTGTT
AAAAATGTCCCAATCAAAGGTTCCTCATATTGTGGGCGATGATGATGAAT
ATCAAGAAGCTACTGCTCCCGAAAGTGACGAGATTACCTGCGAGTCTTCT
GTGGAAAGTGATCAAGATGATGACTGTTCCAACGAAGATGATATGGATTT
GGATGGGGCAGACTGGTCCCCATATGTCACTTATGAGGCGGGTACACCAA
GACGTCCCCACAGTGCTTTGGAGATTACCGAAATTACCGAGTTTCCGAAA
ATTCCAAAGAAAAACCCCACCTTATCCGAACTGGTGATACAGAAGCCAGA
GACTCCGGATCAAAACGACTCGGGATCTCAGGAGCGTCTCACCTTCTCTC
GCGCCAATAATGCGCTATCAGAGTCCATTGGAGCTCGCGTTTCCCAACGT
AGCAGGGGCAACTTGGAACCATTCATCCGTAGAATGGCACGTAGCCCTAC
GCCCGAGGCCTCAGAGGAAAACGGCTCGGTATCACAAGGTCAGCTGCTGG
CCAAGCCCGTGGATGTCACCGAGTTCTTTCACCGCATTGCTGTGGGTCTC
GTCGAGCAGCGCGTCTGCTTGAAGCCTTTCTTGGCATTGCGCAAACATAT
TGCTCAACTGGTGGGTCAGACTTTGAAGAAATCCAAGAGGATGCGCCGTG
CAAGCTTTCTAGACCAT
FMO11891.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14932-RB | 808 | CG14932-RB | 1..730 | 20..749 | 3620 | 99.7 | Plus |
| CG14932-RC | 769 | CG14932-RC | 184..691 | 242..749 | 2510 | 99.6 | Plus |
| CG14932-RC | 769 | CG14932-RC | 1..183 | 20..202 | 915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11790483..11790933 | 299..749 | 2225 | 99.6 | Plus |
| 2L | 23513712 | 2L | 11789908..11790007 | 9..108 | 500 | 100 | Plus |
| 2L | 23513712 | 2L | 11790059..11790115 | 107..163 | 285 | 100 | Plus |
| 2L | 23513712 | 2L | 11790370..11790426 | 242..298 | 285 | 100 | Plus |
| 2L | 23513712 | 2L | 11790172..11790215 | 160..203 | 205 | 97.7 | Plus |
| 2L | 23513712 | 2L | 11790272..11790310 | 203..241 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:20:04 has no hits.
FMO11891.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-25 14:50:50 Download gff for
FMO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14932-RB | 116..864 | 1..753 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:49 Download gff for
FMO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14932-RB | 27..775 | 1..753 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:54:53 Download gff for
FMO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14932-RB | 1..733 | 20..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:54:53 Download gff for
FMO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11789903..11790005 | 1..106 | 96 | -> | Plus |
| 2L | 11790059..11790115 | 107..163 | 100 | -> | Plus |
| 2L | 11790176..11790214 | 164..202 | 100 | -> | Plus |
| 2L | 11790272..11790310 | 203..241 | 100 | -> | Plus |
| 2L | 11790370..11790426 | 242..298 | 100 | -> | Plus |
| 2L | 11790483..11790936 | 299..753 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:49 Download gff for
FMO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11790272..11790310 | 203..241 | 100 | -> | Plus |
| arm_2L | 11790370..11790426 | 242..298 | 100 | -> | Plus |
| arm_2L | 11789903..11790005 | 1..106 | 96 | -> | Plus |
| arm_2L | 11790059..11790115 | 107..163 | 100 | -> | Plus |
| arm_2L | 11790176..11790214 | 164..202 | 100 | -> | Plus |
| arm_2L | 11790483..11790936 | 299..753 | 99 | | Plus |
