FMO11903.5prime Sequence
1211 bp (1068 high quality bases) assembled on 2012-06-21
> FMO11903.5prime
CAGTCGACATGGGCGACATCGAAGTAAAGAAGGAGGAACAACCGACGACG
CCCTCCAATTCCTCGTCCAGTGACGACGACGAGGAGGCCCCAGACGACAC
AATGGATAAGGTTCGACGCTTCTTTGCAAACACTCTACATCTCGGCGGCT
CCTCGGACGCAAAGGAGGAAGTTAAAGTAGAGAAGGTTATTCCAGATTTG
AGTTTTGACGGCTTTGCCGAACATTGGCGTGTGCATGGTTTCCGCAAGAT
TGTGACCATGGTGGGAGCCGGCATATCTACATCTGCTGGCATTCCGGATT
TCAGATCCCCAGGTTCCGGGTTATACAGCAATCTGAAGAAGTACGAGCTG
CCACATCCTACGGCCATATTCGATCTGGACTACTTCGAAAAGAATCCAGC
GCCGTTTTTTGCACTGGCCAAGGAACTTTACCCTGGATCCTTCATTCCCA
CGCCGGCCCACTACTTTATCCGTTTGCTTAACGACAAGGGACTACTGCAG
CGCCACTACACCCAGAACATAGACACGCTAGACCGGCTTACTGGCCTGCC
CGAGGACAAGATCATTGAGGCCCATGGCAGCTTCCACACCAACCACTGCA
TTAAGTGCCGCAAGGAGTACGACATGGACTGGATGAAGGCGGAGATCTTC
GCCGATCGTCTGCCCAAATGCCAAAAGTGCCAAGGCGTTGTTAAACCAGA
CATTGTTTTCTTTGGCGAAAACTTGCCAAAGAGATTTTACTCCAGTCCTG
AAGAGGATTTCCAGGATTGCGATCTGCTGATCATCATGGGCACATCGTTG
GAAGTGCAACCGTCTGCTTCACTGGTGTGGAGACCAGGACCACGTTGCAT
TCGCCTCTTGATCAATCGCGATGCAGTGGGTCAGGCCAGCTGTGTGCTCT
TTATGGATCCCACACGCGATCGCTACTCTTCGATAAAGCCCAATAACACT
AGGGATGTGGCCCTTTCTGGGCGACTGTGATGCTGCCGTAATGGCTCCTG
CCAAAGCCTTCGGCTGGGACCAGAGCTGCAGCACCTAATTACAGTGAAAG
AAAAAACTGACCGGCAGCCAGAATTAGTGGAGGAAGCTGCACAAGGCCAA
AGAAGAACCCGCATCGGAACCCGGATAAAAAGACTTCCGGCCATAGGAGA
CAAAAAGATGCCTCGCCTTGCAGCCTTCCAAGACACATTCCGTTTGGGCC
GCCATCCAAGG
FMO11903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sirt2-RB | 2285 | CG5085-RB | 124..1280 | 8..1166 | 5205 | 97.3 | Plus |
| Sirt2-RA | 1399 | CG5085-RA | 124..1280 | 8..1166 | 5205 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20329029..20329822 | 283..1074 | 3560 | 98.2 | Plus |
| 3R | 32079331 | 3R | 20328875..20328973 | 184..282 | 495 | 100 | Plus |
| 3R | 32079331 | 3R | 20328727..20328822 | 92..187 | 480 | 100 | Plus |
| 3R | 32079331 | 3R | 20328588..20328673 | 8..93 | 430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:08:27 has no hits.
FMO11903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:51 Download gff for
FMO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt2-RA | 111..1222 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:44 Download gff for
FMO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt2-RA | 111..1222 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:18 Download gff for
FMO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt2-RA | 116..1227 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:18 Download gff for
FMO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20328580..20328673 | 1..93 | 95 | -> | Plus |
| 3R | 20328729..20328820 | 94..185 | 100 | -> | Plus |
| 3R | 20328877..20328973 | 186..282 | 100 | -> | Plus |
| 3R | 20329029..20329857 | 283..1113 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:44 Download gff for
FMO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16154451..16154542 | 94..185 | 100 | -> | Plus |
| arm_3R | 16154599..16154695 | 186..282 | 100 | -> | Plus |
| arm_3R | 16154302..16154395 | 1..93 | 95 | -> | Plus |
| arm_3R | 16154751..16155579 | 283..1113 | 97 | | Plus |
