FMO11905.5prime Sequence
1142 bp (982 high quality bases) assembled on 2012-06-21
> FMO11905.5prime
CAGTCGACATGGCCGGTCTGGTTAAGAGCGATACGGAGGACTTTATCGAC
TGGTGGCCGCACACGGTGTTCTATCAGATCTACCCGAGGTCATTCAAGGA
CAGCAATGGCGATGGTATCGGCGATTTGAAAGGAATCACCTCCAAGCTGC
GCTATCTGGCGGACACTGGCATCACGGCCACCTGGTTGAGTCCCATTTTT
CAGTCGCCCATGATTGACTTTGGCTATGATATATCGGATTACAAGGCAAT
CCAGCCGGAGTATGGCACCATGCAGGATTTCGAGGAGCTGATCGACACGG
CTTTCGAGCTGGGCATCAAGGTTGTTCTGGACTTTGTGCCGAATCACAGC
TCGGATCAGCATGAGTGGTTCAAGAAGTCTGCGGCAAGGGAGCCGGGTTA
CGAGGATTTCTATGTGTGGCACGATGGCATCGTCCAGGAGAATGGCACTC
GGGTGCCACCCAACAACTGGCCATCGGTGTTCTACGGATCCGCTTGGGAG
TGGCACGAAGGTCGTGAGCAGTATTACCTGCACCAGTTCACCAAGGAGCA
GCCGGACTTGAACTATCGCAATCCCAAAGTGGTTCAGGCCATGGATGATG
TGTTGCTTTTCTGGCTCAACAAGGGCGTAGCTGGTTTCCGCATCGATGCA
GTGAATCATTTGTTTGAGGACGAATCTCTTAAAGATGAGCCATTGAGTGG
CAAAACAACGGATTCACTTTCCTATGACTACACTAAGCACATCTACTCGA
GAGATCTGCCAGAAGTCTTGGAATGATTCATCACTGGAGGCAACTGCTGG
ATGACTTTAGTGCCAAGCACCCCCGAAAGACCACACGCATCATGATGACG
GAGGCGTACGCAGGACTAACCCAGCTGGCGGACTACTACGAGGATCCAAC
GGGGTTCGGGGCTCCCATCTGCCCTTCACTTCACTTTATTCACGGAGGTC
AAAGGCGACTCGGAAGCGCCGGGACCATGTCCACACCGTGGAGAAGTGGC
TGATCTCAGTGCCACGTGGGCCCCGGTCCACTGGGTCTTGGGCAACCCCG
AACAACCCCCGAGCCCCTTCCCAATCCGGTACAGCACAGGTGGAACCCCC
TGAAACTGTCTCCTGCCTCACCCTTCCCGGCTGGTCCCCCGC
FMO11905.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mal-B2-RD | 1927 | CG14935-RD | 106..1226 | 9..1130 | 4880 | 96.5 | Plus |
| Mal-B2-RC | 2237 | CG14935-RC | 106..1226 | 9..1130 | 4880 | 96.5 | Plus |
| Mal-B2-RA | 1935 | CG14935-RA | 114..1234 | 9..1130 | 4880 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11850412..11851490 | 9..1085 | 4625 | 96.7 | Plus |
| 2L | 23513712 | 2L | 11847327..11847925 | 51..649 | 820 | 75.8 | Plus |
| 2R | 25286936 | 2R | 8453751..8453888 | 75..212 | 195 | 76.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:08:33 has no hits.
FMO11905.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:52 Download gff for
FMO11905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14935-RD | 100..1162 | 4..1063 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:48 Download gff for
FMO11905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mal-B2-RA | 108..1170 | 4..1063 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:22 Download gff for
FMO11905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mal-B2-RA | 108..1170 | 4..1063 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:22 Download gff for
FMO11905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11850406..11851468 | 4..1063 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:48 Download gff for
FMO11905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11850406..11851468 | 4..1063 | 97 | == | Plus |
