Clone FMO11909 Report

Search the DGRC for FMO11909

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:9
Vector:pMK33-CFH-BD
Associated Gene/Transcriptegh-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11909.5prime Sequence

804 bp (804 high quality bases) assembled on 2012-06-21

> FMO11909.5prime
CAGTCGACATGAACTCCACCACAAAGCATCTGTTGCACTGCACACTGCTC
ATCACTGTGATAGTTACCTTCGAAGTATTCTCCGGCGGTATTAAGATTGA
CGAGAACTCGTTCACGCTCGTGGATCCTTGGACTGAATACGGCCAATTGG
CCACGGTTCTGCTGTACTTATTGCGCTTTCTCACGCTGCTCACGCTGCCC
CAGGTGCTGTTCAATTTCTGCGGCCTGGTATTCTACAATGCCTTCCCCGA
GAAGGTCGTCCTCAAGGGCAGCCCCCTGCTGGCGCCCTTCATCTGCATCC
GTGTGGTCACGCGCGGCGACTTCCCGGATTTGGTTAAGACGAATGTGCTG
CGCAACATGAACACCTGCCTAGACACGGGACTGGAGAACTTTCTCATCGA
AGTGGTCACGGACAAGGCGGTGAATCTGTCACAGCATCGACGCATCCGAG
AGATCGTTGTGCCCAAGGAGTACAAGACGAGAACCGGGGCGTTGTTCAAG
TCGCGTGCCCTGCAGTATTGCCTGGAGGATAATGTGAACGTGCTGAACGA
CAGCGACTGGATCGTCCATCTGGATGAGGAGACGCTGCTCACGGAGAATT
CGGTGCGTGGTATCATTAACTTTGTGCTGGATGGCAAGCACCCGTTCGGC
CAGGGCCTGATCACCTATGCCAACGAGAACGTGGTCAATTGGCTGACCAC
ATTGGCGGACAGCTTTCGGGTCTCCGATGATATGGGCAAGCTGCGTCTGC
AGTTCAAGCTCTTTCACAAGCCGCTCTTCAGCTGGAAGGGCAGTTATGTG
GTCA

FMO11909.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
egh-RD 2946 CG9659-RD 845..1640 9..804 3965 99.9 Plus
egh-RB 3303 CG9659-RB 718..1513 9..804 3965 99.9 Plus
egh-RC 3595 CG9659-RC 1494..2289 9..804 3965 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2596215..2597010 9..804 3965 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 03:08:40 has no hits.

FMO11909.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:54 Download gff for FMO11909.5prime
Subject Subject Range Query Range Percent Splice Strand
egh-RB 716..1510 9..803 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:52 Download gff for FMO11909.5prime
Subject Subject Range Query Range Percent Splice Strand
egh-RC 1494..2288 9..803 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:24 Download gff for FMO11909.5prime
Subject Subject Range Query Range Percent Splice Strand
egh-RC 1494..2288 9..803 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:24 Download gff for FMO11909.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2596215..2597009 9..803 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:52 Download gff for FMO11909.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2490248..2491042 9..803 99   Plus