FMO11910.5prime Sequence
703 bp (703 high quality bases) assembled on 2012-06-21
> FMO11910.5prime
TCGGATGCCAGTAGACAGGTAATCAGCCCCGACGACTGCGAAGATCTCAG
CCCGATGCCACAAACAGCTGCTCCACCGGTTCGCAGGCGAGGCGGAATCT
CCGCCGAACCCGTAACCGAAGAGGATGCCACCAACTATGTTAAGAAGGTG
GTGCCCAAGGACTACAAGACGATGAATGCCCTGTCCAAGGCGATTGCCAA
GAACGTCCTGTTCGCTCACTTGGACGAGAGCGAGAGATCCGACATATTTG
ATGCCATGTTCCCTGTGAATCACATCGCCGGCGAGAATATCATCCAGCAG
GGCGATGAAGGCGACAACTTCTACGTGATTGATGTGGGAGAGGTCGATGT
TTTCGTCAACTCCGAACTAGTGACCACCATCAGCGAGGGCGGCAGCTTTG
GTGAACTGGCCCTCATCTATGGCACTCCTCGCGCCGCCACCGTGCGCGCC
AAAACCGATGTGAAGCTGTGGGGAATCGACCGCGACTCCTACCGCCGCAT
TCTGATGGGCTCGACCATCCGCAAGCGCAAGATGTACGAGGAGTTCTTAT
CGCGCGTGTCCATTCTGGAGAGCTTGGACAAATGGGAGCGCCTCACAGTG
GCCGATTCCCTGCAGACGTGCTTCTTCGATGACGGTGAGACGATTGTCAA
GCACGGAGCAGCTGGCGATGACTTCTACATCATCCCTCGAGGGCTGTGCG
GTG
FMO11910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pka-R1-RU | 3570 | CG42341-RU | 666..1365 | 3..703 | 3435 | 99.4 | Plus |
| Pka-R1-RT | 3240 | CG42341-RT | 336..1035 | 3..703 | 3435 | 99.4 | Plus |
| Pka-R1-RS | 3068 | CG42341-RS | 164..863 | 3..703 | 3435 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20832860..20833207 | 3..350 | 1740 | 100 | Plus |
| 3L | 28110227 | 3L | 20833283..20833636 | 349..703 | 1680 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:08:17 has no hits.
FMO11910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:48 Download gff for
FMO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pka-R1-RZ | 410..1110 | 1..703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:37 Download gff for
FMO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pka-R1-RS | 163..863 | 1..703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:12 Download gff for
FMO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pka-R1-RS | 163..863 | 1..703 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:12 Download gff for
FMO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20832859..20833205 | 1..348 | 99 | -> | Plus |
| 3L | 20833283..20833636 | 349..703 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:37 Download gff for
FMO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20825959..20826305 | 1..348 | 99 | -> | Plus |
| arm_3L | 20826383..20826736 | 349..703 | 98 | | Plus |
