FMO11918.5prime Sequence
1095 bp (974 high quality bases) assembled on 2012-06-21
> FMO11918.5prime
CAGTCGACATGGAAATGGAAGACAATTGGTGGGTCACCAAGTTAAAGGCT
CTGGAGTCGAAGCCACAAAGGCTGGATGCGCTGACCGCCATGAACTCAGC
CATCGCAAAGGAGGCGGCTCTTCCGCGTCAAATAATTGAACGCCTGCTGA
CCACGGACCAATTGTATGACTGCGCCAATCCCGCCGCGGATTCCCATGTT
CCCAAGGATCAGGCCGTGGACGTGACCCTGGAATTGCTGTGCCACTGCCT
TGATCAGCTGGCGATGGACACCGCCGACGAGCAGCTGTCCAGTCTGCTAA
GACGTGGCTTGACCCACTCGAATCCAGCCTTGCGTGCCCAGGTGTTGGCC
AGTTTGTTCAAGAAGCTGCTTCGCCAGTTGACCGTCGGTCAGGTTCTCAC
CCTGCCCAACAATGAGCTTATTTTCCTCATCTTGGACGAGCTGAAACAAC
CGGATACGCAGAGTACCTCTCTGGCCATCAATATCCTATCCATCGTGCTG
CCTCAGCGAATCAGCAATGCCGATGTGCAGGCAAAGCTAGTACAGCTCCT
AAAGCAAAATGAGATCGTGCGCTGTCGCGCCTACGAATTGGCAGTGGTCC
TGGCCAAGAAAAGTGCCACCTTACTCAGTGACGTTACATTTATTCTGGAT
GCGGCTCTCAGCGAACTGGATAACGACGATGTTTTATTGCAGCTAGCGTA
ATGGAGCTCCTAGTGCCACTGGCCGAACAAAACCATGGTCTGTCCTACAT
GGAAACGTCGTCGCGTTTTGGATATAATCAGCTATCGGGTCCCACGCGTC
GAAGAGCATCCGCTAGACGCCCTGCTCGTTCCCAGCATTATGAGTTTTCG
CAAATTTCCGTATACCAGCCTCTGAAAATCATTGCGCTACCCGCACATGC
TGCTGCTTGTCATGCAGCTTCATCGAGATGAAAGTATCTGCCCACTGCCA
TGATACGCTGCATTGCCACTACTCCACAAGCAGATACTGCTGACATGCAC
TTTACGGGGCATGAGAGTCTTAGAGTATGTCGCATACTAGAGCTATCCGG
CCAATCAGAAAGCTGCTCATCCTGATGAATTAGACTCAGAACGCC
FMO11918.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12096-RC | 2985 | CG12096-RC | 70..1094 | 9..1010 | 4490 | 97.3 | Plus |
| CG12096-RB | 1830 | CG12096-RB | 70..1094 | 9..1010 | 4490 | 97.3 | Plus |
| CG12096-RA | 2040 | CG12096-RA | 280..1304 | 9..1010 | 4490 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13159883..13160782 | 9..902 | 4155 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:09:04 has no hits.
FMO11918.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:59 Download gff for
FMO11918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12096-RA | 178..1209 | 9..1017 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:08 Download gff for
FMO11918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12096-RA | 280..1311 | 9..1017 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:33 Download gff for
FMO11918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12096-RA | 280..1311 | 9..1017 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:33 Download gff for
FMO11918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13159883..13160914 | 9..1017 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:08 Download gff for
FMO11918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13053916..13054947 | 9..1017 | 97 | | Plus |
