FMO11919.5prime Sequence
1156 bp (1054 high quality bases) assembled on 2012-06-21
> FMO11919.5prime
CAGTCGACATGAATCAAACGCAAGTAAATAATTTCCTCAAGTGCTTCCTG
CAAATCGATGAGCCGTCCAACCGTTGGACATCACGTCACGACGGGGAGGA
TCTCGATGATAACGACCATGATCATGATCATGACGACGACAACGACGACG
ACGAGAGTGGCGTTCTGGTTGCCAAGGTCACAGCCATGGTGGTGCTATTT
TGCGCCAGCGCGATCTGCGGGTCCATTCCCTTCTTGCTTAACCGTTGCTA
TCGCTGGACGGAAAACCAGACGAACGCACGATCCGCCATTGTGGTCAAAT
GCCTGCTGTACTTTGGAGGCGGCGTCCTGCTAGCCACCACCTTTCTCCAT
CTCTTGCCCGAAGTTCAGGAGGTCGTCGAAGAGCTGCAGGAGTGCGGCAT
CATCGGAGAGCTCACTTTTCCGCTGGCCGAGCTTCTCATGTGCTGTGGCT
TCTTCCTCATGTACTTCATCGAGGAGGCCATGCACACGTATGTCCATCAT
CATCAGAAGGATGAGGCTGGCGCCGCTTTCGAGCGGGGTCACAGCATCCG
AAACAGCCACCTGCTGAAACCCACCGAAGGCAACGCTACCACACCCACAG
CCCCACCGGCGCCATTGGCTGGCACCGCTGAACTTGGAACACTATCGGTG
CAGAATCTCCTGCAAAACGATCTGGAGCAGCAAAAGTTTGCTACCAAGCC
ACAGCAACAAGCTAATGGACACGGACACAGCCACGGGCATGGACATGGAC
ATAGCCATCTACCAGTAATCGCAGACGATGCCGATGCGGGGGACATGTTG
GCTTCATCTCTGCGCGGACTCTTCATCGTTTCCGCTCTGTCGCTGCACGA
ACTCTTTGAGGGCATGGCCATTGGCCTAGAGAGCTCCGCCAGTTCGGTGT
GGTTTATGTTCGGTGCCGTTTCCGCACACAAATGGTCCTGGCCTTCTGCG
TGGGCGTCTAGCTGATCGTGACAGAACCCGGATGTACTGACCGTTCTCTA
TGTGTGACTTTGCGTGTTAGCCTCTGGGCATCGGAATCGGGATTTGATAA
TCACGCGAAGAGACTCGACCAGTCTGATCTCCGCCATCTGCTAGATCGCT
GCGACCTCAAAACGTGGTGTCCTTGGAATCCTCGAAATCGATCCGGTCTG
CGCATG
FMO11919.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Zip89B-RA | 2011 | CG6898-RA | 412..1586 | 7..1153 | 5070 | 96.9 | Plus |
Zip42C.1-RA | 1290 | CG9428-RA | 646..768 | 833..954 | 230 | 79.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16306169..16307170 | 7..1005 | 4800 | 99.3 | Plus |
2R | 25286936 | 2R | 6716940..6717062 | 954..833 | 205 | 79.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:09:08 has no hits.
FMO11919.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:59 Download gff for
FMO11919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zip3-RA | 402..1453 | 1..1045 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:11 Download gff for
FMO11919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zip3-RA | 407..1458 | 1..1045 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:36 Download gff for
FMO11919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zip89B-RA | 407..1458 | 1..1045 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:36 Download gff for
FMO11919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16306164..16307215 | 1..1045 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:11 Download gff for
FMO11919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12131886..12132937 | 1..1045 | 98 | == | Plus |