Clone FMO11919 Report

Search the DGRC for FMO11919

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:19
Vector:pMK33-CFH-BD
Associated Gene/TranscriptZip3-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11919.5prime Sequence

1156 bp (1054 high quality bases) assembled on 2012-06-21

> FMO11919.5prime
CAGTCGACATGAATCAAACGCAAGTAAATAATTTCCTCAAGTGCTTCCTG
CAAATCGATGAGCCGTCCAACCGTTGGACATCACGTCACGACGGGGAGGA
TCTCGATGATAACGACCATGATCATGATCATGACGACGACAACGACGACG
ACGAGAGTGGCGTTCTGGTTGCCAAGGTCACAGCCATGGTGGTGCTATTT
TGCGCCAGCGCGATCTGCGGGTCCATTCCCTTCTTGCTTAACCGTTGCTA
TCGCTGGACGGAAAACCAGACGAACGCACGATCCGCCATTGTGGTCAAAT
GCCTGCTGTACTTTGGAGGCGGCGTCCTGCTAGCCACCACCTTTCTCCAT
CTCTTGCCCGAAGTTCAGGAGGTCGTCGAAGAGCTGCAGGAGTGCGGCAT
CATCGGAGAGCTCACTTTTCCGCTGGCCGAGCTTCTCATGTGCTGTGGCT
TCTTCCTCATGTACTTCATCGAGGAGGCCATGCACACGTATGTCCATCAT
CATCAGAAGGATGAGGCTGGCGCCGCTTTCGAGCGGGGTCACAGCATCCG
AAACAGCCACCTGCTGAAACCCACCGAAGGCAACGCTACCACACCCACAG
CCCCACCGGCGCCATTGGCTGGCACCGCTGAACTTGGAACACTATCGGTG
CAGAATCTCCTGCAAAACGATCTGGAGCAGCAAAAGTTTGCTACCAAGCC
ACAGCAACAAGCTAATGGACACGGACACAGCCACGGGCATGGACATGGAC
ATAGCCATCTACCAGTAATCGCAGACGATGCCGATGCGGGGGACATGTTG
GCTTCATCTCTGCGCGGACTCTTCATCGTTTCCGCTCTGTCGCTGCACGA
ACTCTTTGAGGGCATGGCCATTGGCCTAGAGAGCTCCGCCAGTTCGGTGT
GGTTTATGTTCGGTGCCGTTTCCGCACACAAATGGTCCTGGCCTTCTGCG
TGGGCGTCTAGCTGATCGTGACAGAACCCGGATGTACTGACCGTTCTCTA
TGTGTGACTTTGCGTGTTAGCCTCTGGGCATCGGAATCGGGATTTGATAA
TCACGCGAAGAGACTCGACCAGTCTGATCTCCGCCATCTGCTAGATCGCT
GCGACCTCAAAACGTGGTGTCCTTGGAATCCTCGAAATCGATCCGGTCTG
CGCATG

FMO11919.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
Zip89B-RA 2011 CG6898-RA 412..1586 7..1153 5070 96.9 Plus
Zip42C.1-RA 1290 CG9428-RA 646..768 833..954 230 79.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16306169..16307170 7..1005 4800 99.3 Plus
2R 25286936 2R 6716940..6717062 954..833 205 79.7 Minus
Blast to na_te.dros performed on 2014-11-28 03:09:08 has no hits.

FMO11919.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:59 Download gff for FMO11919.5prime
Subject Subject Range Query Range Percent Splice Strand
Zip3-RA 402..1453 1..1045 98 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:11 Download gff for FMO11919.5prime
Subject Subject Range Query Range Percent Splice Strand
Zip3-RA 407..1458 1..1045 98 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:36 Download gff for FMO11919.5prime
Subject Subject Range Query Range Percent Splice Strand
Zip89B-RA 407..1458 1..1045 98 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:36 Download gff for FMO11919.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 16306164..16307215 1..1045 98 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:11 Download gff for FMO11919.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12131886..12132937 1..1045 98 == Plus