FMO11923.5prime Sequence
765 bp (765 high quality bases) assembled on 2012-06-21
> FMO11923.5prime
CAGTCGACATGAAACCCATTTGCTTCGCACTCTGCGTATTTTCGCTAGGC
CTTTTCTATTTGGCCAGCGCTGAGATTGGTGAAAATGTGAAGATCCAGAC
GTACAAGAAGTATAGTTCATCCTGCAAGGAGTTGAACCCAAAGAAGAGCG
GTGTCCAGAAGATCCAAGTGGGCTCCGATGTAATCGAAGTGTACTGCGAT
GTGACAATCGCCGGAAAGGGCTGGCTGGTCGTCCAGCGAAGAGTCAGTGT
GGAGGAGAACTTCTACCGCAATTGGACCTCTTATCAGACGGGTTTCGGTG
ACCTTAAGGGTAACTTCTTCATCGGATTGAATAATCTGAACAAGATCTCG
TCCCTGCAACCCCAAGAGTTGTATATTGAGTTGGTGGACTTTGCTGGCGA
GAAGCGGTATGCCCACTACAGTGTGTTTCACGTGGGCAACGTGTACAGTA
ATTACCCGATAACCCAGCTGGGCGCGTACAGTGGAACCGCCGGAGACAGT
TTGAGCTATCATCTGTACCAACCTTTCAGCACCTTCGATAGGGATAACGA
CAATGCCACTATCAACTGTGCTGCCAGATATATGGGAGCCTGGTGGTACA
GAGAATGCCTTAGCAGCAATCTGAATGGTGCATATCTGGGTGGAAACCAC
ACCGATCCCGCGCTGTTTGGCTCTGGAATCGTTTGGGGGAGAATGGAAGG
GCTTCACATACAGCTACAAGACTGTTAACATTATGGTGCGACCAAAAGCA
AGCTTTCTAGACCAT
FMO11923.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5550-RA | 926 | CG5550-RA | 26..763 | 9..747 | 3670 | 99.9 | Plus |
CG5550-RB | 938 | CG5550-RB | 26..775 | 9..747 | 3540 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16816614..16817221 | 9..616 | 3040 | 100 | Plus |
2R | 25286936 | 2R | 16817281..16817414 | 613..747 | 625 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:08:46 has no hits.
FMO11923.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:22:55 Download gff for
FMO11923.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5550-RA | 17..765 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:57 Download gff for
FMO11923.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5550-RA | 19..767 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:27 Download gff for
FMO11923.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5550-RA | 19..767 | 1..752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:27 Download gff for
FMO11923.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16816607..16817221 | 1..616 | 99 | -> | Plus |
2R | 16817285..16817418 | 617..752 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:57 Download gff for
FMO11923.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12704112..12704726 | 1..616 | 99 | -> | Plus |
arm_2R | 12704790..12704923 | 617..752 | 97 | | Plus |