FMO11926.5prime Sequence
902 bp (894 high quality bases) assembled on 2012-06-21
> FMO11926.5prime
CAGTCGACATGCACGAGAGACAAGTGAAGAAGTTGAAGGGCAGCCATTAT
GTGGCCACGCACGGTCGCCTCACTCCGGATCCGCCCTACGTCCACTCGAA
CCGCGGCTATTCCACCGACGGCGATGAGACCCACTCCCACCGGGCGCCCT
CGGAGCGCACCTATTCGGAGTACACGTTGACCCACGAGCGCATCTCGCCG
CAGTACAATGGTTCGCGCAAGAAGCGCTCCTCATCCTCGAATGGAAACCA
TCAGCATCAGCACCTGCAGAGCAGCTACAGCCACAGTCAGATGGGCCTCT
CCAGTTCGCCGGACAACGGAGGACCTCGCTCCCTCAGCGGACCGCCGCCC
ACGCGCCAGCCACCGCGTGCTCCGTCCGCCCTGAGCTATGACCAGGCTGG
TGACGCCGGCAGCGACATATATGTGACCAGTGCCGCCTACAAGGCGCCCT
CCGAGATCAGTCGCTACAGTCAGCGTCCAGTGTCGCGAGGAGCTCCACGG
AGTGTTTACTCCGTGGCCAGTACGGCCAAAACCGGACGCAGTGCGCGCTC
GACGACTCGGCGAGGCGCCAAAGTGGAAACCATGTCCGCGCCGAATCCAT
TTTGCCCCAATGTCAAGGGCGTGTGCTGTCTGATGCTGTTTGCTCAACTT
GTGCCTGATCCTGGTGACGCTAGGATTCGTCATTTGTGGTGCAGTTCTAT
GAGCCACTGTACGTGTGGATACTGGGAATTGTGTTTCCTGGTCTTCGGCT
TCCTCACGCTAATCGGCTGCATGATCTACTGTGTGTACGTGTTCCGGGAT
GCGAAGACGCCATCGCATGTGCGCAACGAGGATCTCTACTTGTACGCGGC
ACTGGTAGAAGAATATCGGATACCACGCCGGCAGGAAGATCAATTACTAT
GC
FMO11926.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14830-RC | 1773 | CG14830-RC | 421..1302 | 9..897 | 4180 | 98.5 | Plus |
| CG14830-RB | 2038 | CG14830-RB | 686..1567 | 9..897 | 4180 | 98.5 | Plus |
| CG14830-RA | 1776 | CG14830-RA | 424..1305 | 9..897 | 4180 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7251680..7252108 | 460..32 | 2130 | 99.8 | Minus |
| 3L | 28110227 | 3L | 7251210..7251621 | 873..458 | 1820 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:09:26 has no hits.
FMO11926.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:03 Download gff for
FMO11926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14830-RA | 417..1307 | 1..902 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:22 Download gff for
FMO11926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14830-RA | 420..1310 | 1..902 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:45 Download gff for
FMO11926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14830-RA | 420..1310 | 1..902 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:45 Download gff for
FMO11926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7251680..7252108 | 32..460 | 99 | <- | Minus |
| 3L | 7251184..7251618 | 461..902 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:22 Download gff for
FMO11926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7244284..7244718 | 461..902 | 96 | <- | Minus |
| arm_3L | 7244780..7245208 | 32..460 | 99 | <- | Minus |
