FMO11929.5prime Sequence
737 bp (737 high quality bases) assembled on 2012-06-21
> FMO11929.5prime
CAGTCGACATGGGATTTGGTAAACCTCGTGGCGGCGGTGGCGGCGGCGGA
AGAGGCTTCGGTGGAGGCGGAGGCGGAGGAGGACGAGGATTTGGTGGAGG
TGGAGGTGGACGAGGAGGTGGCGGAGGACGCGGAGGTGGCGGCGGATTCG
GTCGAGGTGGAGGTGGACGTGGTGGCGGCCGTGGAGCCTTCGACACTGGT
CCACCAGAGAGAGTCATCCCCTTGGGCAACTATGTTTACTCCTGCCAAAA
CGACCTTGTGTGCAAAGTTGATATTCAGGATGTTCCCTACTTCAACGCGC
CCATTTTCCTTGAAAACAAGGAGCAAGTAGGCAAAATCGACGAAATCTTT
GGAACAGTTCGGGACTACAGCGTGTCCATCAAGCTGTCGGACAACGTCTA
CGCCAACAGCTTCAAGCCAAATCAGAAACTGTTTATCGACCCTGGAAAGC
TGTTACCCATCGCCAGATTTCTGCCGAAACCTCCACAACCAAAAGGCGCC
AAGAAAGCCTTCACAAATAACCGAGGTGGAGGCGGCGGTGGCGGTGGATT
TGGAGGCCGAGGTGGCGGCCGCGGAGGAGGTGGTCGCGGTGGTGGCGGCG
GACGAGGTGGAGGCGGATTCCGAGGAGGTGCTGGTCGCAATGGAGGAGGT
GGCGGCGGCGGCGGTTTTAACAGAGGACGAGGAGGCGGTGGCGGCGGCGG
CGGTGGTCGGGGTCGGTGGGCAAGCTTTCTAGACCAT
FMO11929.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4038-RA | 957 | CG4038-RA | 75..785 | 9..719 | 3555 | 100 | Plus |
| Fib-RA | 1318 | CG9888-RA | 258..334 | 525..601 | 190 | 83.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21096325..21096708 | 581..198 | 1920 | 100 | Minus |
| 2R | 25286936 | 2R | 21097040..21097231 | 200..9 | 960 | 100 | Minus |
| 2R | 25286936 | 2R | 21096130..21096271 | 719..578 | 710 | 100 | Minus |
| 2R | 25286936 | 2R | 23074274..23074350 | 601..525 | 190 | 83.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:09:37 has no hits.
FMO11929.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:05 Download gff for
FMO11929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4038-RA | 73..791 | 9..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:29 Download gff for
FMO11929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4038-RA | 75..793 | 9..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:49 Download gff for
FMO11929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4038-RA | 75..793 | 9..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:49 Download gff for
FMO11929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21096122..21096269 | 580..729 | 97 | <- | Minus |
| 2R | 21096327..21096707 | 199..579 | 100 | <- | Minus |
| 2R | 21097042..21097231 | 9..198 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:29 Download gff for
FMO11929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16983627..16983774 | 580..729 | 97 | <- | Minus |
| arm_2R | 16983832..16984212 | 199..579 | 100 | <- | Minus |
| arm_2R | 16984547..16984736 | 9..198 | 100 | | Minus |
