FMO11932.5prime Sequence
1142 bp (1021 high quality bases) assembled on 2012-06-21
> FMO11932.5prime
CAGTCGACATGGCCCAGCAGGGTCAGAGTGGAAGATCCCCAAGTGGTCCG
CCCGGACCTCCTCCACCCCGTCCACCAAAAACGCCGCCGGGCGCATCGCC
ACGTGGAACGCCAACAGCAGACTCGACTCCGGGCGATGTGACTCCGGCTC
GAGGACCTCCGCCACCGCCAGCGACCAAACGCGTTTCAATAGGAGTGGGT
TCCACGCGTTCTGCCCCACCACCAGCAACTGATCCAACCGGTCCGCCTCC
AACTGCCGGAAAACCAGTGAGAGACACCGGTCCATCGACATCGCCTAGGC
CAAGTCTTCGGGATCCTGGCCAATCGACTTCTGATAAGCCATCGACTTCT
GATAAGCCATCGACTTCTGATAAGCCATCGACATCTGCACGGACAACTGT
TCGGGAGCCGGGTCCATCCTCATCTCCCTCTCGTCCCGTTAGCACTCGTG
AATCTGGGCGTATAACTTTCCAGGAAGCAGCACCATCGACGTCTGCAAAA
GTGGTCAAGCTAGCTGCATCTGAACCTCGACCCGCAAAGCCACCAGAAAA
GGAGGGATTTAGCTTGTTTAAAAGGAAGAAGAAATCCGTGGGCTCAAGTA
CGCCACCTTCACCATCACGTGGGCATAGGGCTCCTTCGATAATCGCGGCT
TCAGCCCTGCAAAATAGGGCCAAAACCAATCGCATCCTTTACACAACCGA
TGAGGAGGTACGCGAAGCCCTCGTCGAGTTCTCTGTGTTCATCATTTTTC
TGATTCTAACATCACTGGTTGTTTTGTCCGTTCGGCATACATATATGTTT
TATTTCAATGACACGATGAAGAAACTATTTACGAATCGGGAAATGGTAGT
GGCTCCTTCGGTCACTGTTGGCTTTGAAAAGCTAATCACTGTGCCGGATT
GTGGGACTATCTAAAATATAACTTTCTTGTAACACTCCACGGCGATTTGA
CTTTTATGGACGACGCCCAAGCGAATCTCACGTCAATGCCACCTGAAGGT
AATTGAGCAGGTTAGTGAGCAGGTAGTGAGCACGTTATGGACCATCACCT
GAAAGTCGTGGGCGAAGCCCTGAAAGGCCCCGAAATTGACGGATTGCAGA
GATTTTAATATATTGCATCATACTTTGACTCCGGGCACAGGG
FMO11932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pkd2-RA | 3271 | CG6504-RA | 110..1218 | 9..1108 | 5135 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12398383..12399142 | 9..768 | 3800 | 100 | Plus |
| 2L | 23513712 | 2L | 12399205..12399511 | 768..1070 | 1155 | 95.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:09:48 has no hits.
FMO11932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:08 Download gff for
FMO11932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pkd2-RA | 76..1192 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:35 Download gff for
FMO11932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pkd2-RA | 102..1218 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:49:55 Download gff for
FMO11932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pkd2-RA | 102..1218 | 1..1108 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:49:55 Download gff for
FMO11932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12398375..12399142 | 1..768 | 99 | -> | Plus |
| 2L | 12399206..12399556 | 769..1111 | 93 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:35 Download gff for
FMO11932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12398375..12399142 | 1..768 | 99 | -> | Plus |
| arm_2L | 12399206..12399556 | 769..1111 | 93 | <- | Plus |
