FMO11940.5prime Sequence
1152 bp (1036 high quality bases) assembled on 2012-06-21
> FMO11940.5prime
CAGTCGACATGTGGTTGATTGCCTGCCTGTTTATTGTTCCTATTTGCGCT
GCTCCAACAACCCAGAATGTCGAGGCGGATCCCAATTCACGGCTAATGAA
CAACATCCTCAGCTACGTGGCGGAGGATTCCAGTGCGTGCGGCACCTACT
TTCAATATGCCTGCGGCAAGTACGCAGTACGTCACCGCGACGATCCCTTC
ACGGAGATCATCCAGATGCTGGACCACAAGGTGAACGGAAACCTAGTCCA
ACTGATGCACGAGCTGCACCAGCGCTCCCAGTCACCCGGCTTCAACGAGT
CCAGTGTGGAGGCCAAGGTCTTGCACTTCTACCGCACCTGCCGTGAAGCT
CCGCCGAGTACACGCAAGATGGAGCACTACCTTAGACTAGCCCCTCCTGG
CCAGGCACTTACATGGCCCCAGTTTATGCCCCGCGGCGAGCCATGGCCAA
AGGCTCAATTCAAGTGGATGAAGTCCTTGGGACACCTATACCGCTATGGG
TTTACCAATGTTTTGGTGAACGTGTTGGTCTTACGGAGCTCTGAGAACAG
TAACCGCTTCCGACTGGACATCAGTATGCCTAGTCTCGAAGGGGACGCGC
AGCACCTGGGCGGTTTTCTAAGTACCCTCGCCACTCTCCAGATCATTGGT
GTGCCGACGAAAAGCATATTACCCCTTGTGCGGAAGATCAGAAGGCTAGA
GTCCGCCATACGCGTCCTAACCGAAGTGGACGACGATGATGAAAGCGAGA
CTTGGACTTTGCGCCAGTGGGAGTACAAAACCGGCTACGCATGGCAGGGT
TTCGTCGAGTCAATAGTTGGCCATAGTGTCTCACATCACTACGTGATGCA
GCGCAGAATGCAAAGTACTTCACGGGCCTTAAGCGGCTGATGGACTCCAC
GGACGCCGAGGTGGTGGCCAACTACATCATGACCCGATTCGTGCTCTACC
TCATAGACGACTTTATGACAGCATGAGCACATTGATTGCGTCACGGATAT
GCGCGCACATGAGTCTGGCATCGAAACCTGCTCTACAAGGAGCGCTTTCT
GGAACCTGCCGACCCTACAGGCAGTACACCAGAGGTTACGAAAGTTCTTT
GGACAGCTGGCGCCCGCGATTCATCTGCAAATCAATGAATCGCTGGGCTT
AC
FMO11940.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42370-RA | 2078 | CG9508-RA | 1..1133 | 9..1138 | 5200 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6384458..6385512 | 1059..9 | 4940 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:10:18 has no hits.
FMO11940.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:13 Download gff for
FMO11940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42370-RA | 1..1043 | 9..1047 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:53 Download gff for
FMO11940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42370-RA | 1..1043 | 9..1047 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:07 Download gff for
FMO11940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42370-RA | 1..1043 | 9..1047 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:07 Download gff for
FMO11940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6384470..6385517 | 1..1047 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:53 Download gff for
FMO11940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6384470..6385517 | 1..1047 | 98 | | Minus |
