FMO11945.5prime Sequence
1122 bp (1041 high quality bases) assembled on 2012-06-21
> FMO11945.5prime
CAGTCGACATGCTAACCCTACTAATTCGGCTGGCGGCGACGGCCATACCT
GTTTGTGCTATTCTCTTTGTGGCCGGCACGTTTCTGTTCAAGGTTTATAT
TAGCATACGATCCCGCTACGACGCCCGTGTCAACTGCTGGTTCTGCAATG
GCAATGTACGAGTTCCGTACCAGGATCGCAACAGTTGGACCTGCCCGTCA
TGCGAGCAATACAATGGATTCACCAAGGACGGCGACTACAACCGGGATAT
TACGTCGCAGCGGGACTGCAGCCTTGGCTCTCAGAAGAACAGCTCCAAAG
GCAGCTCCAGCATCTGTGCCAACTCATATTATTCCGATGTCCTGACTGCT
CAACCTCCTGCTCCCAAAAACGGCCTGTGCGACCAGTGCAACGAGGCGCA
GCGCCTGAAGGTCGAGAAGCTCTCTCAATTCGAGCCCAAGAACGAGTCCC
GATTCGATCAGGAACTAAAGGTTTACAGAGAACGACTGGAGAAGCAGTTT
CGCCTGTGTAGCAGCTGCGAACGACATGTGAATAAAGTCCTGCACGAGAA
GAAGAAAATGGTGTTGAGCTCCAAGTTCTTGAACTATATCATCAAGGGAG
CATCGTTGCTCAAGCAGCCGCACTTCAACCGATTGGCCGCTGCCCAAAAG
CAGTTTAAACTGCAGCGATACCGCATTCTGATGACCATCCTGACTGTAGT
CAATATTTTGTGCCTGCTCTGCCGGCTGCCGAATGCAACTTCCATTCAGT
TTACGACTTACCTTGGAAAATTCATTGGGCTAACCTTGTTCTACGCCTAC
TCCCACGTGCTGGCCTTAATTCGAGTGGTGACTTCGAGCGTAGGCATTTT
CCTGGAACAGCGCGAAATGATAGCCAAACTTTTATTGTATGGCCGTACCT
TTGGCAAGCTCTTGCTGTATTCGCTTGGCATAGCCAACAGCAAGTGCAGC
AAGCAACCTTCGCATCCTGTTTTATTGGGATCTACCCAATATGCATGCTG
GCCCTGTGTTTCTGCCACGATATACGACGATGAAATTTACGCGATCACAT
GCTCATTGTTATGGATGGTATGCCATGGAATCGATCTGATCTTACTCATG
GCAATCCTTAACTGGTGGCAGT
FMO11945.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7744-RA | 2585 | CG7744-RA | 186..1266 | 9..1078 | 5055 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19453545..19454118 | 477..1045 | 2565 | 98.1 | Plus |
| 2R | 25286936 | 2R | 19452845..19453214 | 109..478 | 1820 | 99.5 | Plus |
| 2R | 25286936 | 2R | 19452689..19452789 | 9..109 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:10:37 has no hits.
FMO11945.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:17 Download gff for
FMO11945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7744-RA | 176..1268 | 1..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:04 Download gff for
FMO11945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7744-RA | 181..1273 | 1..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:16 Download gff for
FMO11945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7744-RA | 181..1273 | 1..1084 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:16 Download gff for
FMO11945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19452684..19452789 | 1..109 | 96 | -> | Plus |
| 2R | 19452846..19453214 | 110..478 | 99 | -> | Plus |
| 2R | 19453547..19454164 | 479..1084 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:04 Download gff for
FMO11945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15340189..15340294 | 1..109 | 96 | -> | Plus |
| arm_2R | 15340351..15340719 | 110..478 | 99 | -> | Plus |
| arm_2R | 15341052..15341669 | 479..1084 | 97 | | Plus |
