FMO11950.5prime Sequence
963 bp (963 high quality bases) assembled on 2012-06-21
> FMO11950.5prime
CAGTCGACATGGAGCTGGCTCTGAATAAACCATCATCCTGCGTGGACTGC
TGCAAGGACTGCACTCTGCTGCCCTGCTGTTCTGCCTCCGCCTGCTGCGA
CGCTAGCTGCGACGCCGCCTGCGGGTTAATACCGCCCGATCCAGTCAGAT
ATGAGTACCAGGAGCCCGAGGAGAACTTCATATCCATTGATGATGTGAAA
ATCAAGAGTTTCCTGTGGCAAATCGGCCAGCAGCAGAGGGAAAAGGAGTT
GGAAATCAAAAGGATCATGGAACAAGAGAAAAGGGAGAAAAGAGAGAAGG
AAAGGCGGGAGGCCGAAAAGCGAAGAGATCAAGAGGTAATCGAATTGGAC
GAGGAGGAGGCTCAATCTCCTCGGGGTCTCATAATCAGCGCAGCCAGGAG
TCTAGCCCATTGGAATTCATCCATTAGGAGGGTAACACCAGATATCGAAC
TGATTCCCAGACGGGTGCACAGGGTTGTCGCAGAAATCGAACTGAGTGAT
AGTGATCACGATGAAGATAGTGAAGTAGATGAGGATGTAAGTCTTCCATC
AAACGCTGTAAGCTGCGTCCTGAATGAGCAGAGACAGGATGGAAGCCAGA
ATCCACAGGAACTGGTGATCATCGTGCCCTCCGACCAGGAGGACGAACAG
AAGACAGACAATGTCATCAAGAGGAAATCTTCTGGGTCGAGGAGATTAGT
AAAGAGGCGTCCAGGTGCCAACAGAAGGGGAAGGCATATGTACGAATGTC
CTGACTGCGGGAAGAAAGTGCAATCTAATTACAATCTAAGACGTCATATG
ATGATCCACACAGGTGAAAGACCATTCCCTTGTGATCTGTGCGAGCGACG
TTTTCGGGAATTCAGCCGATCTTAAAAAGCATCGTCGAAGGCACTCACAC
GATCCACATTTCATTTGCATTGATCTTGTCCCTTGGGAGCACCTTTGGAG
CACGGATCCTACA
FMO11950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4496-RC | 2623 | CG4496-RC | 532..1472 | 9..952 | 4615 | 99.5 | Plus |
| CG4496-RB | 2219 | CG4496-RB | 128..1068 | 9..952 | 4615 | 99.5 | Plus |
| CG4496-RA | 2238 | CG4496-RA | 128..1068 | 9..952 | 4615 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7186830..7187636 | 815..9 | 4035 | 100 | Minus |
| 2L | 23513712 | 2L | 7186631..7186769 | 952..811 | 530 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:11:00 has no hits.
FMO11950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:21 Download gff for
FMO11950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4496-RA | 128..1077 | 9..962 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:13 Download gff for
FMO11950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4496-RA | 128..1077 | 9..962 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:24 Download gff for
FMO11950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4496-RA | 128..1077 | 9..962 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:24 Download gff for
FMO11950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7186622..7186766 | 814..962 | 94 | <- | Minus |
| 2L | 7186832..7187636 | 9..813 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:13 Download gff for
FMO11950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7186622..7186766 | 814..962 | 94 | <- | Minus |
| arm_2L | 7186832..7187636 | 9..813 | 100 | | Minus |
