FMO11952.5prime Sequence
952 bp (877 high quality bases) assembled on 2012-06-21
> FMO11952.5prime
CAGTCGACATGCAAAACTGCAGGCGCTGCATCAGCCTAACGGGCCTTTTG
CGGATGACACTCTACCTGCGTCCGTCCTTTTCAATTGATTTGTCCCTGCG
CCGACTGCATCGTGCGGCCTTTTTATTTTCTCGAAAAAAACCGGAGACGA
ACTTGTCCACGTTGTTCAAGCCAGTACAGGTGCACGCTTATGTGGATTCA
GAGGACGTAGGTTCCGAGCTGTCGGGCAAACTGGAAAAGGCTGAGCTGCT
GAAGATTCTTAATAAGTTCACCCAACGTCGCGAAATCAAGTCACTATGCA
ACGAAAACGGACTGGACGACTACCTACAGCAACAGGCCTTTGGCTCATTC
CGAAGATTTTGCATCGAGGCAGAAAACCTTCCAGTAGATCTGCACATAAC
CTTTAGCGATATAACACAGGGAGCGGGTCATATCGATGACATCTTCCCGT
ACTTCCTACGACACGCAAAGACAGTATTCCCGCACCTGGACTGCATGGAC
GACCTGAAAAAGATTTCCGACCTGAGGCAGCCTGCCAACTGGTATAGCAA
CGCTCGCGCCATCACCCGAAAGATTGTTTTTCATGCCGGACCCACAAACT
CCGGTAAGACTTACCATGCCATGGAGAGATACCTGAGTGCGAAGACTGGG
GTCTATTGCGGGCCACTAAAGCTTCTAGCCACTGAGTGTACAACAAGGCC
AATGAACGTGGCACTCCCTGCGATCTGGTCACAGCGAGAGCGCAAATTCG
GCATCAGCGAAGTTTGCCAGCCATCACGTCGCGTGCACTGTGAAATGACT
CGGTGATACTCCATATGAGTGCTGTATCGATGAATACACAGATCCGCGAC
CCCAGCGGGATGGCTGACGCGTGCTCTGACTGATCGCGATGAATTGCATG
TTGTGTGACAGCGCATGAACTCTGCAAAATTTGCAACACTGCCGAACTGT
GA
FMO11952.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9791-RC | 2530 | CG9791-RC | 110..1028 | 8..902 | 4010 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4312029..4312508 | 318..792 | 2150 | 99 | Plus |
| 3R | 32079331 | 3R | 4311664..4311974 | 8..318 | 1555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:11:04 has no hits.
FMO11952.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:22 Download gff for
FMO11952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9791-RC | 125..1013 | 1..874 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:15 Download gff for
FMO11952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9791-RC | 106..994 | 1..874 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:25 Download gff for
FMO11952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9791-RC | 106..994 | 1..874 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:25 Download gff for
FMO11952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4311660..4311974 | 1..318 | 98 | -> | Plus |
| 3R | 4312030..4312533 | 319..814 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:15 Download gff for
FMO11952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 137382..137696 | 1..318 | 98 | -> | Plus |
| arm_3R | 137752..138255 | 319..814 | 98 | -> | Plus |
