FMO11955.5prime Sequence
453 bp (446 high quality bases) assembled on 2012-06-21
> FMO11955.5prime
TGGTCTTCCCAAGGCGCCTGCTCTGCCTCCCAAGGCGAAGAGCACTCCCG
AGCCGGACTACGAGATCATCGAATTCTCCAGCCAGCAGTACTCCAACGAA
CCGATGAAGACCACAGTGATCAGAACCAAGACACCAGATAACAAACTAAA
GTGCACCTTGTGCGGTTCCCAGAATCCCTGGGTAACCTGTGCCGAGTGCG
CCGGCCAAATCTTTTGCGCCTCCTGCGACGACATGTTCCACAAGCATCCC
AAACGTAAGCAGCACATGAGAAAGGCTGTGGAGCAGGGCACACCGCCGAT
TCCGCCAAAGGCACAGGCCGGTGGTGGGGCACCACCACCAGTGGCACCTC
CACGACGCAGCAAACGAGGCCTTTTGACACCGTTTCTGGGCCGCAAGGAT
CAGATGCTGCCGCCGCCCTCGCCCACGCCCTCGCACAAGTCGCTGGTCGG
CTG
FMO11955.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11321-RJ | 8906 | CG11321-RJ | 265..717 | 1..453 | 2235 | 99.6 | Plus |
CG11321-RI | 9009 | CG11321-RI | 245..697 | 1..453 | 2235 | 99.6 | Plus |
CG11321-RH | 2907 | CG11321-RH | 245..697 | 1..453 | 2235 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6770133..6770273 | 275..135 | 705 | 100 | Minus |
2L | 23513712 | 2L | 6770335..6770471 | 137..1 | 670 | 99.3 | Minus |
2L | 23513712 | 2L | 6769953..6770083 | 403..273 | 655 | 100 | Minus |
2L | 23513712 | 2L | 6769687..6769739 | 453..401 | 250 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:11:15 has no hits.
FMO11955.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:24 Download gff for
FMO11955.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11321-RB | 246..698 | 1..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:22 Download gff for
FMO11955.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11321-RH | 240..692 | 1..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:30 Download gff for
FMO11955.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11321-RH | 245..697 | 1..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:30 Download gff for
FMO11955.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6769953..6770081 | 275..403 | 100 | <- | Minus |
2L | 6770134..6770270 | 138..274 | 100 | <- | Minus |
2L | 6770335..6770471 | 1..137 | 99 | | Minus |
2L | 6769687..6769736 | 404..453 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:22 Download gff for
FMO11955.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6769953..6770081 | 275..403 | 100 | <- | Minus |
arm_2L | 6770134..6770270 | 138..274 | 100 | <- | Minus |
arm_2L | 6769687..6769736 | 404..453 | 98 | <- | Minus |
arm_2L | 6770335..6770471 | 1..137 | 99 | | Minus |