FMO11957.5prime Sequence
1045 bp (1001 high quality bases) assembled on 2012-06-21
> FMO11957.5prime
CAGTCGACATGAACAGCTTAGTGCGACGCAGCGCCCAGCAGCTGAGCCTC
TGGCGTACATATTGCATAAAGCACAATGCTTCAGAGGCGGCTTCTCCCGG
ACGGAACGCAGGCAGGCCCAACTACGAGGAGTTCATTGGCCGTCATCAGC
GACAGGCCCAGTGCAGCATTGTGGTCCAGGTGAGCTCCGAAAAGTCGTAT
GAGGAGTTGTATAACTACTGCAGCAGCTTCGGCTCGATCATGGGTGCCCA
CCACTACTGCGTGCGGCAGGACGAGACCCTGCACTACATCCTGCTGGAGT
ACGCCACGTCGGACGAGGCGGCGGCTGCCATCGGAGCGGGCGTTACCAAT
GGCGAGCTGAGCGGCGTGCCCGTGCGATCTCCCTTTCTGTGGTTCCGGGC
AGCGGGAGGAGGCAGACGGAGCCCCAAGCTAGTTGCCAATACAGCGCCCG
CACTGCTATCCTTGGACGGCACCCGGCAGGTGGATCAGCGCCACCTACTG
GGGCTCTTACGTGGTGCAGCGGACATCGAAGAGCAGGTGCAGCAGCTGTA
CGAGCACACGCGCCTGAATGAGCTGGGAATCCGTATGCGCTTTCTAGCCG
CCCTACAGGTGCAGCAGGCCATTGCCGGCATGTTTCCCGCCGCCCAGGCA
CAGCCCTTTGGCTCGTCGGTCAACGGATTTGGGCGAATGGGCTGCGACCT
GGACCTCATCCTGCGCTTTGACAGCGATATGGGAGCTAAGATCCCACTGG
AGGCGGCGGTGCCCTCGCGACTCGTGTACCACACCAAGGAGAACCTGAGC
AACGGACGCTCGCAGACGCAAAGGCACATGGAATGTTTTGGAGATATGCT
GCATCTGTTCCTGCCCGGCGTGTGCCATGTGAGACGTATTTTGCAGGCGA
GGGTGCCCATCATCAAGTACCACCATGAGCATCTGGAACTGGAGTGGACC
TCTCATGAGTAACCTCACTGACTTCATAATGTCGGACTGCTTTACTGTTC
GGTGAAATGGAATCCGCGCGTACGGCCGTTGACCTTTACCAATCC
FMO11957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11418-RC | 2243 | CG11418-RC | 111..1147 | 8..1041 | 4975 | 99 | Plus |
| CG11418-RA | 2319 | CG11418-RA | 111..1147 | 8..1041 | 4975 | 99 | Plus |
| CG11418-RB | 1374 | CG11418-RB | 139..202 | 979..1041 | 250 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1348222..1349080 | 965..109 | 4180 | 99.7 | Minus |
| X | 23542271 | X | 1349143..1349247 | 112..8 | 525 | 100 | Minus |
| X | 23542271 | X | 1346044..1346099 | 1041..986 | 185 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:11:23 has no hits.
FMO11957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:25 Download gff for
FMO11957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11418-RA | 102..1150 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:27 Download gff for
FMO11957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11418-RA | 102..1150 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:32 Download gff for
FMO11957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11418-RA | 102..1150 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:32 Download gff for
FMO11957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1348222..1349077 | 112..965 | 99 | <- | Minus |
| X | 1349144..1349250 | 1..111 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:27 Download gff for
FMO11957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1242255..1243110 | 112..965 | 99 | <- | Minus |
| arm_X | 1243177..1243283 | 1..111 | 96 | | Minus |
