Clone FMO11964 Report

Search the DGRC for FMO11964

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:119
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11454-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11964.5prime Sequence

740 bp (740 high quality bases) assembled on 2012-06-21

> FMO11964.5prime
CAGTCGACATGGACTTGCAGTTACTAATGCAGCAAATGTATAGTGGTGCG
TCGGTCATGACGATTTCGGAAACGAACATAGATGGTTACAGATACGGTAT
TCCATCTGGCCAGCACCAAGAGCAGCCAATTTACCCTTTCCTGCCCAATG
AAAACGGTGACCAGTTGGTTGGGCAACTGGAGGACGACGACGATGAGGAG
GAGGACGAGGAGCAACGGACTCTGTTCTGCGGGAATCTCGACGAGCGCGT
GACGGAGGAGATCCTTTACGAGGTGTTCCTGCAAGCTGGCCCCATCGAAG
GAGTGCGGATACCGACCGATAACAATGGGCGTCCCCGGAATTTCGGGTTT
GTCACATACCAACGCCTGTGTGCGGTGCCTTTTGCCCTAGACTTGTACCA
GGGCCTTGAACTGTTCCAAAAGAAAGTCACCATCAAGCAGCAGGGCGGCA
AGCAGCTACCTGCCTACAACCAAAGTCGTCTGCGCAATCAGTTCATGATG
GAGGCTCTACCGCAGCCATCGCCACTGCGTCACGCCCGACACAGTTTGCA
TAACGGCAAGCCGTACGATCGCAATCCTTTTGGACACAACGCCGATCAAC
GGCGCCGGAGCGACAGCTCCGTAATGGAACGCAACCGGCTAAAACCACAG
CAACACCACCAGCACATGCAGGGAGGCAGCAGAAGATCGGACCAACGCTC
CAACAACAAACGCAGATTGCTTGCAAGCTTTCTAGACCAT

FMO11964.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-RA 905 CG11454-RA 56..769 9..722 3570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 143378..144091 9..722 3570 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:11:41 has no hits.

FMO11964.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-21 10:23:29 Download gff for FMO11964.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 70..792 9..732 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:37 Download gff for FMO11964.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 56..778 9..732 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:50:43 Download gff for FMO11964.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 56..778 9..732 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:50:43 Download gff for FMO11964.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 143378..144100 9..732 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:37 Download gff for FMO11964.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 143378..144100 9..732 99   Plus